| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722414
Identifier: 53722414
GI number: 53722414
Start: 1899336
End: 1899821
Strand: Reverse
Name: 53722414
Synonym: BPSS1387
Alternate gene names: NA
Gene position: 1899821-1899336 (Counterclockwise)
Preceding gene: 53722415
Following gene: 53722413
Centisome position: 59.87
GC content: 59.67
Gene sequence:
>486_bases ATGCGCCGAGTGCTGCTGGATCGTAGCGATGAAGTCATGCGCTTCGTTGCCGACAGGACTGGAGAAAGCCGCTACGACGA TTATGCGACGATCGGCCTCGAGAGGGATGGTCGTATTGTCGCGGGGGTCGTCTATCAGGGCCACGGCGGGCCCAACGTGC TGATGCACTTCGCGCTCGACGGATCGCGCCATCTTGCTACGCCGGCGTTCGTCTGCGCAGTGTTTACTTATCCGTTCAAG GTGCTGCGCTGCAATCGGGTAACGGGCCTTGTGCGCACCGACAATCATGAAGCGCAGCGGTTGGACGAACATCTCGGATT TGTGCGGGAAGGGGTGATGCGCGCGGGCGCGAGCGATGGAACGGATTTCATCCTGTATGGAATGTTGAAGGCCGAATGCA GATTCTTGAGCGGCAAGTATGTCGAGGCGCTGAGGGTCGAGCTGGCCGGAAGCATCGACGGCGTTCTCGCTTCGGTACAT TCGTAG
Upstream 100 bases:
>100_bases GGCGCAGAATCGGAAGGCATTTGCAGAGAACGTCAATCCCACGCTCAATCAATTCGGCATTCCGTTGCCGACATGACGAC GCAAGCCGCAGGAGCATGCA
Downstream 100 bases:
>100_bases CGAGATGAAGGTGTCGACACAAGCCGATCGGCGCGAGGGTGTCGAACTGATGTTGATGCGAATCTTCATATATGACGTCG ATGCTCTTTTTAAAAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRRVLLDRSDEVMRFVADRTGESRYDDYATIGLERDGRIVAGVVYQGHGGPNVLMHFALDGSRHLATPAFVCAVFTYPFK VLRCNRVTGLVRTDNHEAQRLDEHLGFVREGVMRAGASDGTDFILYGMLKAECRFLSGKYVEALRVELAGSIDGVLASVH S
Sequences:
>Translated_161_residues MRRVLLDRSDEVMRFVADRTGESRYDDYATIGLERDGRIVAGVVYQGHGGPNVLMHFALDGSRHLATPAFVCAVFTYPFK VLRCNRVTGLVRTDNHEAQRLDEHLGFVREGVMRAGASDGTDFILYGMLKAECRFLSGKYVEALRVELAGSIDGVLASVH S >Mature_161_residues MRRVLLDRSDEVMRFVADRTGESRYDDYATIGLERDGRIVAGVVYQGHGGPNVLMHFALDGSRHLATPAFVCAVFTYPFK VLRCNRVTGLVRTDNHEAQRLDEHLGFVREGVMRAGASDGTDFILYGMLKAECRFLSGKYVEALRVELAGSIDGVLASVH S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17853; Mature: 17853
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLLDRSDEVMRFVADRTGESRYDDYATIGLERDGRIVAGVVYQGHGGPNVLMHFALD CCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEC GSRHLATPAFVCAVFTYPFKVLRCNRVTGLVRTDNHEAQRLDEHLGFVREGVMRAGASDG CCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC TDFILYGMLKAECRFLSGKYVEALRVELAGSIDGVLASVHS CCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MRRVLLDRSDEVMRFVADRTGESRYDDYATIGLERDGRIVAGVVYQGHGGPNVLMHFALD CCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEC GSRHLATPAFVCAVFTYPFKVLRCNRVTGLVRTDNHEAQRLDEHLGFVREGVMRAGASDG CCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC TDFILYGMLKAECRFLSGKYVEALRVELAGSIDGVLASVHS CCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA