| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722348
Identifier: 53722348
GI number: 53722348
Start: 1811570
End: 1812529
Strand: Reverse
Name: 53722348
Synonym: BPSS1323
Alternate gene names: NA
Gene position: 1812529-1811570 (Counterclockwise)
Preceding gene: 53722349
Following gene: 53722346
Centisome position: 57.12
GC content: 64.17
Gene sequence:
>960_bases ATGGACATATCGAAGATTCAGCACAGCGCGGTCGCGCTCGATGCATCATCCGATTCCTCTTCCGGACAGCAGGCAAGCGG GCACACGGCGGCACGGCAGACGTCGTCGCGCGGCGCGGGCGCGGCGCTCGGCGGCCTGAAGGAACTGCAGGATCTGAAGC GCGGCGATCTGATCATGGAACACGGCAACATGCATGCGGTGATGTATGCCGGAGGCGACAAGCCGCTCGTTCATTCGACG AACGGGAAATTCTTCGGTGTCCTTCAGCAGGGCCCGAATTACTTGACGAAGAAGTTCGGCAACGAGGCGCCCACGAAGCT GCCGGTCTATCGGATGAAGAACGCCGATTCGCCGATTCCCTCGGAAGCGGCGCGCATCGGCGAACAATGGGCGATTCGCT CGGGCGATACCGAGACGACGAAGACCAAGACGCCGTTCGGCGAAAACCGCCTGAACGACGCGGACGAAGACAAGGCCGTG GAGTGGTCGCCCGAAGCGACGTTTCGCGCGGCGCGCGCGGCGCTCAGAAGCGACGAGGGCATGCCGCTCAGCAAGCAACA GGGCGTGAGTTGCTCGCAGTTCGTCACGTACGCCTATCAGGCGGCGGCGCTCAAGAAGGGGGGCGATGCGTCCGGCGGCG CGCACGAAGCGCTCGACTCGGTGAAGCAGGCCGGCGCACATCGGCAAGGCGCGTTCAAGACCGCGGAGAACAAGGTGCAG CAACAGGCCGGGCTGGTGCAAGGCGCACATGAGCAGGCAACGCAAGCGATGCCGCACACGCTGCAGGTCAATGCGAAGCA CATGACGGCGGATGTCCTCGCCGAGCGATTGCGCGAGCGCGGCGGCGATTTCGAGCGGGTGGGGTACGCGGTGCCGTACG AGAAGGACGGCGAATCCGGCGTCAAGCTGTTGCCGAAGGACGATCCTCGCGCGACGCAGAAGATTTCGAACATCGAATGA
Upstream 100 bases:
>100_bases CCCGCGCGATTCGCGATTCGCGACACGCGTTCGTGCCGCCGCGCTCGCGGGCATCTGCGCTCACTACAGTCGTGGCTTTA CGGCAACGATGGAGAGCGCC
Downstream 100 bases:
>100_bases GCGGCCGACGCGCGGATGCGTTCGCCTGCTTCGGGGCGTGCGCTGCCGCCATGTCTACACGGCCGGCGTGACGCCGGCGG CCGGCTGGTCGAGCCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MDISKIQHSAVALDASSDSSSGQQASGHTAARQTSSRGAGAALGGLKELQDLKRGDLIMEHGNMHAVMYAGGDKPLVHST NGKFFGVLQQGPNYLTKKFGNEAPTKLPVYRMKNADSPIPSEAARIGEQWAIRSGDTETTKTKTPFGENRLNDADEDKAV EWSPEATFRAARAALRSDEGMPLSKQQGVSCSQFVTYAYQAAALKKGGDASGGAHEALDSVKQAGAHRQGAFKTAENKVQ QQAGLVQGAHEQATQAMPHTLQVNAKHMTADVLAERLRERGGDFERVGYAVPYEKDGESGVKLLPKDDPRATQKISNIE
Sequences:
>Translated_319_residues MDISKIQHSAVALDASSDSSSGQQASGHTAARQTSSRGAGAALGGLKELQDLKRGDLIMEHGNMHAVMYAGGDKPLVHST NGKFFGVLQQGPNYLTKKFGNEAPTKLPVYRMKNADSPIPSEAARIGEQWAIRSGDTETTKTKTPFGENRLNDADEDKAV EWSPEATFRAARAALRSDEGMPLSKQQGVSCSQFVTYAYQAAALKKGGDASGGAHEALDSVKQAGAHRQGAFKTAENKVQ QQAGLVQGAHEQATQAMPHTLQVNAKHMTADVLAERLRERGGDFERVGYAVPYEKDGESGVKLLPKDDPRATQKISNIE >Mature_319_residues MDISKIQHSAVALDASSDSSSGQQASGHTAARQTSSRGAGAALGGLKELQDLKRGDLIMEHGNMHAVMYAGGDKPLVHST NGKFFGVLQQGPNYLTKKFGNEAPTKLPVYRMKNADSPIPSEAARIGEQWAIRSGDTETTKTKTPFGENRLNDADEDKAV EWSPEATFRAARAALRSDEGMPLSKQQGVSCSQFVTYAYQAAALKKGGDASGGAHEALDSVKQAGAHRQGAFKTAENKVQ QQAGLVQGAHEQATQAMPHTLQVNAKHMTADVLAERLRERGGDFERVGYAVPYEKDGESGVKLLPKDDPRATQKISNIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34144; Mature: 34144
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISKIQHSAVALDASSDSSSGQQASGHTAARQTSSRGAGAALGGLKELQDLKRGDLIME CCHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE HGNMHAVMYAGGDKPLVHSTNGKFFGVLQQGPNYLTKKFGNEAPTKLPVYRMKNADSPIP CCCEEEEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCCC SEAARIGEQWAIRSGDTETTKTKTPFGENRLNDADEDKAVEWSPEATFRAARAALRSDEG HHHHHHCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCC MPLSKQQGVSCSQFVTYAYQAAALKKGGDASGGAHEALDSVKQAGAHRQGAFKTAENKVQ CCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHH QQAGLVQGAHEQATQAMPHTLQVNAKHMTADVLAERLRERGGDFERVGYAVPYEKDGESG HHHHHHHCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCCCC VKLLPKDDPRATQKISNIE CEECCCCCCHHHHHHCCCC >Mature Secondary Structure MDISKIQHSAVALDASSDSSSGQQASGHTAARQTSSRGAGAALGGLKELQDLKRGDLIME CCHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE HGNMHAVMYAGGDKPLVHSTNGKFFGVLQQGPNYLTKKFGNEAPTKLPVYRMKNADSPIP CCCEEEEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCCCCCC SEAARIGEQWAIRSGDTETTKTKTPFGENRLNDADEDKAVEWSPEATFRAARAALRSDEG HHHHHHCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCC MPLSKQQGVSCSQFVTYAYQAAALKKGGDASGGAHEALDSVKQAGAHRQGAFKTAENKVQ CCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHHHHH QQAGLVQGAHEQATQAMPHTLQVNAKHMTADVLAERLRERGGDFERVGYAVPYEKDGESG HHHHHHHCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCCCCC VKLLPKDDPRATQKISNIE CEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA