| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yjhP [C]
Identifier: 53722346
GI number: 53722346
Start: 1808641
End: 1809741
Strand: Reverse
Name: yjhP [C]
Synonym: BPSS1321
Alternate gene names: 53722346
Gene position: 1809741-1808641 (Counterclockwise)
Preceding gene: 53722348
Following gene: 53722345
Centisome position: 57.04
GC content: 66.21
Gene sequence:
>1101_bases TTGCGCATCGACAGAATCGGCGCGTTTCAATTTCATCCAATACAGCCAATTAAGGCGGACATAGTTTTGCGCCGAGGGTT GTGCAATTTAAAAACTCGAAAAGGGGTTGCCATGCAAAACGTCGATCGTCCGACCGGTTCTTCACTCGCGGGTGCCGCCA TTCTGCTGGAAATCGGCGCCGCATACGGCATCGTCGATTTCATCCGGCATTCGAACGGTTTCGACGTGGCCGCGCTCGCC GAGCGCAGCGGAATCGGCGAGCCGATGATCGCCGACTATGTCGATGCGATGCGCGAGGCCGGGCTCGTCACGCTCGCGAA GGCGGGCGAGCGCGACATCTACCGGCCGGCCGACGATTTTCCCGATGTCGTCAACGATGTCGGCTACCTGTCGTGGGCGC TGCTCGCATGCGCGCCGCTGATCGTCAACGCGCGCGAATTCGCCGCCGACAATGCGCTCGCGCAGGCGCGCCATCCGCGC GACGGCGGGCTCGTCGCGCGCACGTCGAAATGGATGGGCGAGCTGTCGTTCTATCCGCAGCCCGAGCGCGCGATCCTGAA GCTGCGGCCGAAAAAGATCGTCGACCTCGGGTCCGGCTCGGGCGGCTTCCTGATCCGGATGCTGCATCAGCTCGACGGCG CGCGCGGCGTCGGCGTCGATCTCAGCGCGACGGCCACCGAGCAGGCGAAGCAGGCAGCCGAAGCGAACGGCTTCGCCGGG CGGCTCGAATTCCTGCATCGGCCGATCCAGTCGCTCGTCGACGATCCGGCGCCGCTCAAGGGCGCGGACGTCGTGCACGC GGGCTTCGTGATGCACGATCTGCTGCCCGCCGAGGAGCGCACGCTCGACGCGCTGCTCGAAACGTGCCGCGAGCACGCGT CGAGCGGCACCGTCGTGATCGTCGACGCGGTGCCGCTCGCGCCCGACCGGTGGGAGCGTTCGTTCGCCGCGGCCTTCAAT CACCTGCACCGCAACTTCATGTCGCGCCGGCTGCTGAGCGAGGACGCGTGGCGGGAGAAATTCGAGCAGGCGGGGTTCGG AAACGTCGCCGTCGAAACGCTCGGCCACCCCGGTGGCCGGATGATTCTGGGGAGCGCTTGA
Upstream 100 bases:
>100_bases GGGCCCGCGGGATCGAGCCGGTCGGTGCTGCCGGCCCGGCGAAGCGCCGTCGGGCGGCGCGTGCGGCGGGTTCGGCGCGG CGTGCGTCGGGTTACCGCGA
Downstream 100 bases:
>100_bases GGAGATGTTCTTCGTTGTCTTGGGCCGATGTGATGTAGTCACTTCCGAGGAGTGTGTCATGCCGATCACTGTCGATGAAC TGGTTCAGAAAGTCAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MRIDRIGAFQFHPIQPIKADIVLRRGLCNLKTRKGVAMQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALA ERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPADDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPR DGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAG RLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFN HLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHPGGRMILGSA
Sequences:
>Translated_366_residues MRIDRIGAFQFHPIQPIKADIVLRRGLCNLKTRKGVAMQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALA ERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPADDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPR DGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAG RLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFN HLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHPGGRMILGSA >Mature_366_residues MRIDRIGAFQFHPIQPIKADIVLRRGLCNLKTRKGVAMQNVDRPTGSSLAGAAILLEIGAAYGIVDFIRHSNGFDVAALA ERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPADDFPDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPR DGGLVARTSKWMGELSFYPQPERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAG RLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTLDALLETCREHASSGTVVIVDAVPLAPDRWERSFAAAFN HLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHPGGRMILGSA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39643; Mature: 39643
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDRIGAFQFHPIQPIKADIVLRRGLCNLKTRKGVAMQNVDRPTGSSLAGAAILLEIGA CCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH AYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPADDF HHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH PDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPRDGGLVARTSKWMGELSFYPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCC PERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAG CCHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHH RLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTLDALLETCREHASSGTVVI HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEE VDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHPGGR EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCC MILGSA EEECCC >Mature Secondary Structure MRIDRIGAFQFHPIQPIKADIVLRRGLCNLKTRKGVAMQNVDRPTGSSLAGAAILLEIGA CCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH AYGIVDFIRHSNGFDVAALAERSGIGEPMIADYVDAMREAGLVTLAKAGERDIYRPADDF HHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH PDVVNDVGYLSWALLACAPLIVNAREFAADNALAQARHPRDGGLVARTSKWMGELSFYPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCC PERAILKLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLSATATEQAKQAAEANGFAG CCHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHH RLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTLDALLETCREHASSGTVVI HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEE VDAVPLAPDRWERSFAAAFNHLHRNFMSRRLLSEDAWREKFEQAGFGNVAVETLGHPGGR EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCC MILGSA EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA