| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722345
Identifier: 53722345
GI number: 53722345
Start: 1807779
End: 1808636
Strand: Reverse
Name: 53722345
Synonym: BPSS1320
Alternate gene names: NA
Gene position: 1808636-1807779 (Counterclockwise)
Preceding gene: 53722346
Following gene: 53722344
Centisome position: 57.0
GC content: 63.87
Gene sequence:
>858_bases ATGTTCTTCGTTGTCTTGGGCCGATGTGATGTAGTCACTTCCGAGGAGTGTGTCATGCCGATCACTGTCGATGAACTGGT TCAGAAAGTCAAAAGCCATCGCTGCTATAGCCACCCGGTGTTCCTGAACTGGGCGAAGGTCGATCCCGAACCGAAGGTCG TCGGGGCGTTGTTCCATCAGATCCAGCATTTCTGCGCGTCGACGCGCCCGGGCTGGAATTTTCCGCGCGCGCTCGCCGAG CACGGGCTGCAGAAGCAAAGCGAGCTGATGACCGAGATCGTCGACAGCGAATCGGGGCACGGTCCCGAGCTCGCGACGAT GGCGGGCTACATCGTCAATCGCGCGGCGGGCGGCGCGGTGATTCCCGATCTGTACGACCAGGCGGCCGTCGAGGGCGCGC TCAAGCGCTATTCGGACGAACTGCTCGGCTCGCTGCCCGGCTACGACGACGAGACCGGCCTCACGACGCAGGTGCGCCGT GCGATCAACGTGTTCGAGCGCCGCAAGCTTGTCGACGTCGAATCGACGTATCGCAATCTCGGCACCGCGCTCGCGCTCGA GATGATCTCGAATCGCCAGTTGATCCCGGGCGAGAAGCACTGTCTCGTCGACAGCGGGCTGTACGGCGCGTCGCTCGAGG TGCCCGAGATGCACTACCTGCTCGAGCATTGGGGCGAGGTCGGCGCCGAGCAGCAGCATGAGGAGAACGCGCGCGCCGCG GTGAAGCCCGCGCTGGAATCCGAGCATGCGGCGCTCGTGATCGAAGGCGCGCAGGAGTTTCTCGATGCGCTCGCGAGCGT GTGGGATCTGCTCGATGCGTCGCTGCTGGAATCGGGCTACGTGAAGAAGGCGGCGTGA
Upstream 100 bases:
>100_bases GCGTGGCGGGAGAAATTCGAGCAGGCGGGGTTCGGAAACGTCGCCGTCGAAACGCTCGGCCACCCCGGTGGCCGGATGAT TCTGGGGAGCGCTTGAGGAG
Downstream 100 bases:
>100_bases CGATGCCGGGCACGGCGCCGCGCGGCGCCGTTTTTCCGATGCTTGCGGTGCGAGGGAACCATGGCGGCATATTTGCTGGG CAGGATGGCGATCAGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFFVVLGRCDVVTSEECVMPITVDELVQKVKSHRCYSHPVFLNWAKVDPEPKVVGALFHQIQHFCASTRPGWNFPRALAE HGLQKQSELMTEIVDSESGHGPELATMAGYIVNRAAGGAVIPDLYDQAAVEGALKRYSDELLGSLPGYDDETGLTTQVRR AINVFERRKLVDVESTYRNLGTALALEMISNRQLIPGEKHCLVDSGLYGASLEVPEMHYLLEHWGEVGAEQQHEENARAA VKPALESEHAALVIEGAQEFLDALASVWDLLDASLLESGYVKKAA
Sequences:
>Translated_285_residues MFFVVLGRCDVVTSEECVMPITVDELVQKVKSHRCYSHPVFLNWAKVDPEPKVVGALFHQIQHFCASTRPGWNFPRALAE HGLQKQSELMTEIVDSESGHGPELATMAGYIVNRAAGGAVIPDLYDQAAVEGALKRYSDELLGSLPGYDDETGLTTQVRR AINVFERRKLVDVESTYRNLGTALALEMISNRQLIPGEKHCLVDSGLYGASLEVPEMHYLLEHWGEVGAEQQHEENARAA VKPALESEHAALVIEGAQEFLDALASVWDLLDASLLESGYVKKAA >Mature_285_residues MFFVVLGRCDVVTSEECVMPITVDELVQKVKSHRCYSHPVFLNWAKVDPEPKVVGALFHQIQHFCASTRPGWNFPRALAE HGLQKQSELMTEIVDSESGHGPELATMAGYIVNRAAGGAVIPDLYDQAAVEGALKRYSDELLGSLPGYDDETGLTTQVRR AINVFERRKLVDVESTYRNLGTALALEMISNRQLIPGEKHCLVDSGLYGASLEVPEMHYLLEHWGEVGAEQQHEENARAA VKPALESEHAALVIEGAQEFLDALASVWDLLDASLLESGYVKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31399; Mature: 31399
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFVVLGRCDVVTSEECVMPITVDELVQKVKSHRCYSHPVFLNWAKVDPEPKVVGALFHQ CEEEEEECCCEECCCCCEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH IQHFCASTRPGWNFPRALAEHGLQKQSELMTEIVDSESGHGPELATMAGYIVNRAAGGAV HHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC IPDLYDQAAVEGALKRYSDELLGSLPGYDDETGLTTQVRRAINVFERRKLVDVESTYRNL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GTALALEMISNRQLIPGEKHCLVDSGLYGASLEVPEMHYLLEHWGEVGAEQQHEENARAA HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH VKPALESEHAALVIEGAQEFLDALASVWDLLDASLLESGYVKKAA HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFFVVLGRCDVVTSEECVMPITVDELVQKVKSHRCYSHPVFLNWAKVDPEPKVVGALFHQ CEEEEEECCCEECCCCCEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH IQHFCASTRPGWNFPRALAEHGLQKQSELMTEIVDSESGHGPELATMAGYIVNRAAGGAV HHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC IPDLYDQAAVEGALKRYSDELLGSLPGYDDETGLTTQVRRAINVFERRKLVDVESTYRNL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GTALALEMISNRQLIPGEKHCLVDSGLYGASLEVPEMHYLLEHWGEVGAEQQHEENARAA HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH VKPALESEHAALVIEGAQEFLDALASVWDLLDASLLESGYVKKAA HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA