| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722307
Identifier: 53722307
GI number: 53722307
Start: 1754304
End: 1755326
Strand: Reverse
Name: 53722307
Synonym: BPSS1284
Alternate gene names: NA
Gene position: 1755326-1754304 (Counterclockwise)
Preceding gene: 53722308
Following gene: 53722306
Centisome position: 55.32
GC content: 68.62
Gene sequence:
>1023_bases ATGACGCTGATGCGGCTCTTCCTGTTCAACGCGTTCTCGTATTGCTTCCTCCTGCGGCGGGTGGTCAAGCGCATCGCGCT CGGCCGCTCGCCCGCGCGCGGGCTCGGCATGATGCGCTGGTGCGCGGGCGTGTGCCTGCGCCTGTTTCCGTCGATTCGCG GCTCGATCGAGATGTCGGTGCGGCACATGCTGAGCGCGCATCTGAACGACGATCCGGTGCGCATTCGCGGCGTCGCCGAC GGTATCGTGCGCGAGCTGTTCGAGGCCGAGGTCGCGGGGCTGATGCTGCGCTCGCACAGCATCGCTTCGATGAAGACGCT GATCGACCGGATGGAGTGCGAAGGCGAGGGCGTGCTGCGCGCGGCGCTCGCGCGAGGCGGCCCGCTGATGCTCGCGGGGC TGCACTTCGGCAACCTGATGCTGTACGTGTCGAAGCTGCGGCTGATGATTCCCGATGACCGCAAGATGATGATCGTGATG CACAAGGACGCGCCCGGCGCGTTCTTCGACGACGCGCAGCGCCTCGTCCAAGAGTACGGCGCGGGCAAGATCGAGCTGAT CGACATCGAGCAGCGCGTGCATCTGCGCCGGCTCGTCGCGGGCCTGCGCAAGGAAGCGCCCGTGTTCCTGCTGTTCTCCG ATTTGCACGGCCGCTTCGGCAAGACCAACGCATGCCGGCTCGGCGGGCGCTGGGTGCGGCTCGCGGGCGGCGGCGTGAAG CTCGCGGTCGAGCACGACATTCCGATGCTCGTGTCGTACGCGACGGGCGTGCCGTTTCGCGACGCGTGCAAGGTGCATTT CGTCGAGCTCGACGCGCGGCCCGCGCCGCGGATGCTCGGCGTCGCCGACGACGCGTCGCGCGTCGCGGCGGCCCACCAGC GGATCGCCGACAAGCTCGAGGAAGCGCTCGTGAAGCAGCCCGAGCAGTGGCACTTCTGGGAGCACTTCACGCCGTACCTG ATGCCATCCCCGTTGCTCGAGCAGAACGCGCGCGCCGCCGCGCAGACGCTGCGCAGCGCCTGA
Upstream 100 bases:
>100_bases ACGCGTCGATCCTGTCGATGGTCGATCGCATCTACGAGATGCGCGACGGCCGCCTCGCCGATATCACGCCCGCGCGGCAG CCGGAGCTGGAGGTGCAGAA
Downstream 100 bases:
>100_bases CGAGGCTCGCCCATGCCTATCCGGATGAACGCTCTGAGAGAGCAGAAGACGCCGCGCAAGCTCACGCGCGGCACGACGTT CGGCACCGTGATCAACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTLMRLFLFNAFSYCFLLRRVVKRIALGRSPARGLGMMRWCAGVCLRLFPSIRGSIEMSVRHMLSAHLNDDPVRIRGVAD GIVRELFEAEVAGLMLRSHSIASMKTLIDRMECEGEGVLRAALARGGPLMLAGLHFGNLMLYVSKLRLMIPDDRKMMIVM HKDAPGAFFDDAQRLVQEYGAGKIELIDIEQRVHLRRLVAGLRKEAPVFLLFSDLHGRFGKTNACRLGGRWVRLAGGGVK LAVEHDIPMLVSYATGVPFRDACKVHFVELDARPAPRMLGVADDASRVAAAHQRIADKLEEALVKQPEQWHFWEHFTPYL MPSPLLEQNARAAAQTLRSA
Sequences:
>Translated_340_residues MTLMRLFLFNAFSYCFLLRRVVKRIALGRSPARGLGMMRWCAGVCLRLFPSIRGSIEMSVRHMLSAHLNDDPVRIRGVAD GIVRELFEAEVAGLMLRSHSIASMKTLIDRMECEGEGVLRAALARGGPLMLAGLHFGNLMLYVSKLRLMIPDDRKMMIVM HKDAPGAFFDDAQRLVQEYGAGKIELIDIEQRVHLRRLVAGLRKEAPVFLLFSDLHGRFGKTNACRLGGRWVRLAGGGVK LAVEHDIPMLVSYATGVPFRDACKVHFVELDARPAPRMLGVADDASRVAAAHQRIADKLEEALVKQPEQWHFWEHFTPYL MPSPLLEQNARAAAQTLRSA >Mature_339_residues TLMRLFLFNAFSYCFLLRRVVKRIALGRSPARGLGMMRWCAGVCLRLFPSIRGSIEMSVRHMLSAHLNDDPVRIRGVADG IVRELFEAEVAGLMLRSHSIASMKTLIDRMECEGEGVLRAALARGGPLMLAGLHFGNLMLYVSKLRLMIPDDRKMMIVMH KDAPGAFFDDAQRLVQEYGAGKIELIDIEQRVHLRRLVAGLRKEAPVFLLFSDLHGRFGKTNACRLGGRWVRLAGGGVKL AVEHDIPMLVSYATGVPFRDACKVHFVELDARPAPRMLGVADDASRVAAAHQRIADKLEEALVKQPEQWHFWEHFTPYLM PSPLLEQNARAAAQTLRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38094; Mature: 37962
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMRLFLFNAFSYCFLLRRVVKRIALGRSPARGLGMMRWCAGVCLRLFPSIRGSIEMSV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH RHMLSAHLNDDPVRIRGVADGIVRELFEAEVAGLMLRSHSIASMKTLIDRMECEGEGVLR HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AALARGGPLMLAGLHFGNLMLYVSKLRLMIPDDRKMMIVMHKDAPGAFFDDAQRLVQEYG HHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC AGKIELIDIEQRVHLRRLVAGLRKEAPVFLLFSDLHGRFGKTNACRLGGRWVRLAGGGVK CCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCEEEEEECCCEE LAVEHDIPMLVSYATGVPFRDACKVHFVELDARPAPRMLGVADDASRVAAAHQRIADKLE EEEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH EALVKQPEQWHFWEHFTPYLMPSPLLEQNARAAAQTLRSA HHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLMRLFLFNAFSYCFLLRRVVKRIALGRSPARGLGMMRWCAGVCLRLFPSIRGSIEMSV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH RHMLSAHLNDDPVRIRGVADGIVRELFEAEVAGLMLRSHSIASMKTLIDRMECEGEGVLR HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AALARGGPLMLAGLHFGNLMLYVSKLRLMIPDDRKMMIVMHKDAPGAFFDDAQRLVQEYG HHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC AGKIELIDIEQRVHLRRLVAGLRKEAPVFLLFSDLHGRFGKTNACRLGGRWVRLAGGGVK CCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCEEEEEECCCEE LAVEHDIPMLVSYATGVPFRDACKVHFVELDARPAPRMLGVADDASRVAAAHQRIADKLE EEEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHH EALVKQPEQWHFWEHFTPYLMPSPLLEQNARAAAQTLRSA HHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA