| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is mchE [H]
Identifier: 53722306
GI number: 53722306
Start: 1752996
End: 1754291
Strand: Reverse
Name: mchE [H]
Synonym: BPSS1283
Alternate gene names: 53722306
Gene position: 1754291-1752996 (Counterclockwise)
Preceding gene: 53722307
Following gene: 53722305
Centisome position: 55.29
GC content: 63.58
Gene sequence:
>1296_bases ATGCCTATCCGGATGAACGCTCTGAGAGAGCAGAAGACGCCGCGCAAGCTCACGCGCGGCACGACGTTCGGCACCGTGAT CAACGGCGTGGTCGACGTGCCGATTTCGATGCGCTTTTTCTGCTATCTGTCGATCATGATGTTCGCGATGTTCATCGTCG CGCTCGTGCGCCTCACCTACGCGAACACCGAGAGCGTGATGGGGATGCTCACGCCGCGCTCGGGGCTGATCGGCGTCGGC GCGCCGCCCGGATGGGCGGTGCGCGAGGTGTTCGTCGCGAAGGACCAGCACGTGAAGGCCGGCCAGATGCTCTTGAGCGT CACGCGCGACACGAGCTTCGTGTCGCAGGCGAACAACGTGCAGGGCATGCGCGAATCGATCAAGCGGCAGCGCGTGGAGG TCGGTCAGCAGATCGACGCGGCGAAGCTCGAATATCAATCGACGATCCAGCAGATCAACCAGCAGATCGCCGCGTTCGAC GAGAGCCGCGGGCTGATCGACAAGCAGATCCAGGACCAGAAGCGGATCGTCTCCGAATACCAGGAGCGGCGCGACCGCGT GAAGCAACTGCTCAACGAGCAGGTGGTCACGCTCGAGCAGTACAACCAGGTCAACACGCAATACCTGCAGGCGAGCCAGG CGTACCAGGACCTGATGCTGCGCCGCGCCGACCTCGCGAAGAACGCGATGAAGCTGCGCGGCGATCTCGAAACCGTGCAG AGCAAGTACGACGGCTCGAACGCCGAGCTGAAGATCAAGCAGGAAGAGCTGAACTCGAAGGAATACAACATCGACGAGAG CGTGAACCAGGTGCTGTACGCGCCCGCCGACGGCCAGATCGTGCGGCTCGACGTCGTGCAGGGCAGCGTGATCGATCCGC CCGGCACGCGCGTGGTCGAGATCCTGCCGGCGAAGGCGGACGGGCTCATCGCCGAGCTGTACATTCCGTCGTCGAAGGCC GGCTTCGTGAAGCCGGGCCAGGAAGTGAAGCTCGCGTACGGCAGCTATCCGGTCGAGAAGTTCGGTACCTATCGCGGCAA GCTGCTGTCGGTGTCGCCCGTCGCGTTCACCGCGAAGGAGCTGAATCTGCCCGCCGACAACGGCGCGCCGCAGACTTACT TCAAGAGCTGGGTCGAGCTTGTCGACCGCAAGCCGGCGTTCGAAGGCAAGGCGCTCTCGCTGAAGGCCGGCATGACGCTC AGGGCGGACATCGTGCTCGAGAAGCGCACGCTGCTCGAATGGCTGTTCGAACCGTTGTATCGGATCCGGCAGCGGATATT CGGTACGCCCGCGTGA
Upstream 100 bases:
>100_bases CTGGGAGCACTTCACGCCGTACCTGATGCCATCCCCGTTGCTCGAGCAGAACGCGCGCGCCGCCGCGCAGACGCTGCGCA GCGCCTGACGAGGCTCGCCC
Downstream 100 bases:
>100_bases CGGCCGGTGCGTAATGGGTGACAAGCATCGTCGTCGACGTGCGCGCCGCGACTGGCGCGCTCCGGTGTCCTGCTGGCTCG GCGCGACGCTGCTCGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVG APPGWAVREVFVAKDQHVKAGQMLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFD ESRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKA GFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTL RADIVLEKRTLLEWLFEPLYRIRQRIFGTPA
Sequences:
>Translated_431_residues MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVG APPGWAVREVFVAKDQHVKAGQMLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFD ESRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKA GFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTL RADIVLEKRTLLEWLFEPLYRIRQRIFGTPA >Mature_430_residues PIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGA PPGWAVREVFVAKDQHVKAGQMLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDE SRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQS KYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKAG FVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLR ADIVLEKRTLLEWLFEPLYRIRQRIFGTPA
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 48482; Mature: 48350
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTY CCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANTESVMGMLTPRSGLIGVGAPPGWAVREVFVAKDQHVKAGQMLLSVTRDTSFVSQANNV CCHHHHHEEECCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHH QGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDESRGLIDKQIQDQKRIVSEY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVE HHCCCCCCEEEEEHHHCCCCCCCCHHHHHHEEECCCCCCEEEEEEECCCEECCCCCEEEE ILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKE EECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCEEEHHH LNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRTLLEWLFEPLY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHH RIRQRIFGTPA HHHHHHCCCCC >Mature Secondary Structure PIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTY CCCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANTESVMGMLTPRSGLIGVGAPPGWAVREVFVAKDQHVKAGQMLLSVTRDTSFVSQANNV CCHHHHHEEECCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHH QGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDESRGLIDKQIQDQKRIVSEY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVE HHCCCCCCEEEEEHHHCCCCCCCCHHHHHHEEECCCCCCEEEEEEECCCEECCCCCEEEE ILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKE EECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCEEEHHH LNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRTLLEWLFEPLY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHH RIRQRIFGTPA HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]