| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yfbL [C]
Identifier: 53721599
GI number: 53721599
Start: 768200
End: 769426
Strand: Reverse
Name: yfbL [C]
Synonym: BPSS0563
Alternate gene names: 53721599
Gene position: 769426-768200 (Counterclockwise)
Preceding gene: 53721600
Following gene: 53721595
Centisome position: 24.25
GC content: 66.99
Gene sequence:
>1227_bases ATGTCCAAGCTCCAACACCTCGCCGCCGCGGTCTGCGGCGCCCTCTGCGTATCGGCGGCCCATGCCGCGCCGGTGTGGAT CACGCTCTCCGAGCCCGCCCTGCGCGAGCTGCGCGCGCTCGATCCCGCCGTGACGAGCCGCTACAGCGCGGCGCTCGCCA CCGGCGACGCGAAGCGCACCGAAACGATCCACGTCGCGCAGGTCGACGATTCGCTGCTCGAATCGCTGTCGCAGGCGATC CGCCGCACGCGCGGCCACGGCCCGGGCTTTTTCGTGCACGCGACGTTCGACGAAGCGCGCGCGTCGCTGCAGCCGAGCGC GGCGAAGCAGGCGGCCGCGATCGATTACCCGATCACCTACTCGCAACAGGTCCGCAACTGGATCTCGCAACTGCAGGCGA GCAACATCGTCAGCACCATCGTCTCGCTGTCCGGCTTCACGAACCGCTACTACACGACGACGCACGGCGTGGCCGCGTCC GACTGGATCGCGCAGCAATGGAAGCAGTTGGCCGGCTCGCGCACCGACGTGACGGTCGAGCAGTTCACGCATGCCGGCTG GCCGCAGAAATCGGTGATCCTGACGATCAAGGGCAGCGATCCGGCCGCGGGCGTCGTCGTGATCGGCGGCCATCTCGATT CGACCGTCGGCCGCATGAGCGAGAACACGCGCGCGCCCGGCGCGGACGACGACGCATCCGGCATCGCAAGCCTCACCGAG GCGCTGCGCGTGCTGCTCGCGAACCGCTACCAGCCGAAGCGCACGCTCAAGTTCATCGGCTACGCGGCGGAAGAGGCGGG CCTTCTCGGCTCGCAGGCGATCGCGAAGCAGTTCAGGGCGCAGAACGTGAACGTCGTCGGCGCGTTCCAGCTCGACATGA CGAACTACAAGGGAGATCCGAAGGATATCTATCTGATCAGCGACTACACGAACGCGACACAGAACACGTACCTCGCGAAC CTCGCGAAAGCGTATCTGCCCGAGCTCGCGGTCGGCACGTCGCAATGCGGCTATGCGTGCTCCGATCACGCGTCGTGGAA CGCGCAGGGCTATCCGGCGTCGTTCCCGTTCGAAGCGGATCAGAACGACAATCCGTACATCCATTCCGCGTATGACACGC TCGAGCGGTCGGACTCGCAAGGCAACCACGCGCTGAAGTTCAGCAAGCTCGCGCTCGCGTACGCGGCGGAGCTGGGCGGC GGGCTGAGCGCGTCCGCGAAGCGGTAA
Upstream 100 bases:
>100_bases GAGAAAAAGACGTAAGCGAGAACGACGCGGGGCGCGCGGCACGGTCTGCCGCGCGCCCGTCCCCTCGACTGCATCTCCCC TCACCCCGAGGAGATCGAAC
Downstream 100 bases:
>100_bases ACGGCACCGGGAGCGGCGCGCACCGCTCCCGAGCCGCAACGCATCGCCCGCCGATCAGAACGAGTGGCGCATCCCGATGC GAATGTCCGCCTGCGTTTGC
Product: aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSKLQHLAAAVCGALCVSAAHAAPVWITLSEPALRELRALDPAVTSRYSAALATGDAKRTETIHVAQVDDSLLESLSQAI RRTRGHGPGFFVHATFDEARASLQPSAAKQAAAIDYPITYSQQVRNWISQLQASNIVSTIVSLSGFTNRYYTTTHGVAAS DWIAQQWKQLAGSRTDVTVEQFTHAGWPQKSVILTIKGSDPAAGVVVIGGHLDSTVGRMSENTRAPGADDDASGIASLTE ALRVLLANRYQPKRTLKFIGYAAEEAGLLGSQAIAKQFRAQNVNVVGAFQLDMTNYKGDPKDIYLISDYTNATQNTYLAN LAKAYLPELAVGTSQCGYACSDHASWNAQGYPASFPFEADQNDNPYIHSAYDTLERSDSQGNHALKFSKLALAYAAELGG GLSASAKR
Sequences:
>Translated_408_residues MSKLQHLAAAVCGALCVSAAHAAPVWITLSEPALRELRALDPAVTSRYSAALATGDAKRTETIHVAQVDDSLLESLSQAI RRTRGHGPGFFVHATFDEARASLQPSAAKQAAAIDYPITYSQQVRNWISQLQASNIVSTIVSLSGFTNRYYTTTHGVAAS DWIAQQWKQLAGSRTDVTVEQFTHAGWPQKSVILTIKGSDPAAGVVVIGGHLDSTVGRMSENTRAPGADDDASGIASLTE ALRVLLANRYQPKRTLKFIGYAAEEAGLLGSQAIAKQFRAQNVNVVGAFQLDMTNYKGDPKDIYLISDYTNATQNTYLAN LAKAYLPELAVGTSQCGYACSDHASWNAQGYPASFPFEADQNDNPYIHSAYDTLERSDSQGNHALKFSKLALAYAAELGG GLSASAKR >Mature_407_residues SKLQHLAAAVCGALCVSAAHAAPVWITLSEPALRELRALDPAVTSRYSAALATGDAKRTETIHVAQVDDSLLESLSQAIR RTRGHGPGFFVHATFDEARASLQPSAAKQAAAIDYPITYSQQVRNWISQLQASNIVSTIVSLSGFTNRYYTTTHGVAASD WIAQQWKQLAGSRTDVTVEQFTHAGWPQKSVILTIKGSDPAAGVVVIGGHLDSTVGRMSENTRAPGADDDASGIASLTEA LRVLLANRYQPKRTLKFIGYAAEEAGLLGSQAIAKQFRAQNVNVVGAFQLDMTNYKGDPKDIYLISDYTNATQNTYLANL AKAYLPELAVGTSQCGYACSDHASWNAQGYPASFPFEADQNDNPYIHSAYDTLERSDSQGNHALKFSKLALAYAAELGGG LSASAKR
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28E subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320623, Length=351, Percent_Identity=30.4843304843305, Blast_Score=171, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012189 - InterPro: IPR007280 - InterPro: IPR007484 [H]
Pfam domain/function: PF04389 Peptidase_M28; PF04151 PPC [H]
EC number: =3.4.11.10 [H]
Molecular weight: Translated: 43718; Mature: 43587
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLQHLAAAVCGALCVSAAHAAPVWITLSEPALRELRALDPAVTSRYSAALATGDAKRT CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCC ETIHVAQVDDSLLESLSQAIRRTRGHGPGFFVHATFDEARASLQPSAAKQAAAIDYPITY CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCH SQQVRNWISQLQASNIVSTIVSLSGFTNRYYTTTHGVAASDWIAQQWKQLAGSRTDVTVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEHH QFTHAGWPQKSVILTIKGSDPAAGVVVIGGHLDSTVGRMSENTRAPGADDDASGIASLTE HHHCCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALRVLLANRYQPKRTLKFIGYAAEEAGLLGSQAIAKQFRAQNVNVVGAFQLDMTNYKGDP HHHHHHHCCCCCHHHHHHHHEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCC KDIYLISDYTNATQNTYLANLAKAYLPELAVGTSQCGYACSDHASWNAQGYPASFPFEAD CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QNDNPYIHSAYDTLERSDSQGNHALKFSKLALAYAAELGGGLSASAKR CCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKLQHLAAAVCGALCVSAAHAAPVWITLSEPALRELRALDPAVTSRYSAALATGDAKRT CHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCC ETIHVAQVDDSLLESLSQAIRRTRGHGPGFFVHATFDEARASLQPSAAKQAAAIDYPITY CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHCCCCCCCH SQQVRNWISQLQASNIVSTIVSLSGFTNRYYTTTHGVAASDWIAQQWKQLAGSRTDVTVE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEHH QFTHAGWPQKSVILTIKGSDPAAGVVVIGGHLDSTVGRMSENTRAPGADDDASGIASLTE HHHCCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALRVLLANRYQPKRTLKFIGYAAEEAGLLGSQAIAKQFRAQNVNVVGAFQLDMTNYKGDP HHHHHHHCCCCCHHHHHHHHEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCC KDIYLISDYTNATQNTYLANLAKAYLPELAVGTSQCGYACSDHASWNAQGYPASFPFEAD CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QNDNPYIHSAYDTLERSDSQGNHALKFSKLALAYAAELGGGLSASAKR CCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1627651; 1569090; 1550363; 8087555; 8647077; 10413478; 11401547 [H]