| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721600
Identifier: 53721600
GI number: 53721600
Start: 769544
End: 771247
Strand: Reverse
Name: 53721600
Synonym: BPSS0564
Alternate gene names: NA
Gene position: 771247-769544 (Counterclockwise)
Preceding gene: 53721601
Following gene: 53721599
Centisome position: 24.31
GC content: 67.84
Gene sequence:
>1704_bases ATGCAGACATCCCGTAAAGCACTGCCGCTCGCGCTGGGTCTTGCCATCGGCCTCGGCGCCGCGCTGCCCGCGTGGGCCGA TTCGAAGGCACCGAGCCCGCAGGAGGAAAGCCGGCGCGCGAGCCTCACGCGCGGCGTCGTGGCGCCTGCGGAACAGGCCG GCAAGACCGGGCAGTTCCGCCCCGGGGCCGTTGCCGTGACGCTGGCGAGCCCGGCGTTTCATGCGAAGAAGGCCGATGCG GCGGCGATGGCGCGCGAGTACGTCACCGCGCGCGCAGCGCAGCTCGGCCTCGACAAGGCCGCGCTCGCGAATCTCGTCGT CGCGTCCGAACGCGCCGACGCCGCGTTCACCGTCGTGCGCTTCCAGCAGCGCGCCGCGGGGCTGCCCGTCTATGACAGCG ACATCGCGGTCACGGTCGCGCCGGACGGCCGCGTGCTGTACGTCGCGAGCAAGGCGGTGAGCGGCGTCGCGGCCGTGTCG AGCAAGACGCAGGCGGTCGACGAGCAGCAGGCGCTCGACCGCGCGCGCGCCTACCTCGGCGTCGGCGGCTTCGTGAACGT GCAGTCGCAGCTCGTCGCATTCGTCGACGGCGCGGGCACACATACCGCGTGGAAGGTGAGCGGCAGGCCGCAGGACAGCC TGCACGGCGACTGGGAGCTGATCATCGACGCGGGCAGCGGCGAAGTGCTGCGCGCGCAAGACAAGGCATCCTACGCAACG GACGGCAGCGGGCTCGTGTTCCGGCCGGATCCGTTGTCCCCGACGAAAAGCAGCTACGGCAGCCCCGGCTTCAAGGACAA CAACGATGCGGACTCGCCGCAACTGAGCGCCGCGCGCGTGCGCGTGACGCTCAAGGATCTGACGCAGACGAGCGGCGGCT ACAAGCTGAGCGGCCCGTATGCATCGTGCATCGATTTCGATGCGCCGCTCGACAAGGCGTGCCCGGTTCAGGCGTCGACG ACCTTCGATTTCACACGCTCGAACCTCTATTTCGAGGCGGTGAACGCGTATTACCACATCGACACGTTCCTGCGCTACGT GAACCTGACGCTCGGCATCAAGGCGTTGCCGTACCAGTACGCGGGCGGCGTCCAGTACGATCCGCACGGCCAATCCGGCG ACGATAACTCGTCGTACTCGCCGAGCTCCGGCAGGTTGTCGTTCGGGCAAGGCGGCGTCGACGACGCGGAAGACGCGGAT GTCGTGATTCACGAGCTCGGCCACGGCATTCACGACTGGATCACCAACGGCGGACTGTCGCAGGTCGAGGGCCTGTCCGA AGGCACGGGCGACTATCTCGCGGCCGCATACAGCCGCGACTTCAACCAATGGAGCCCGTCCGATGCGCAGTATCACTGGG TCTTCAACTGGGACGGCCACAACGAATTCTGGGCCGGCCGCGTCACCAATTACAACGTCGGCCGCACGTACGCGCAGATC CGCAATGCCGCGATCCACACCGCCGGCCAGTACTGGGCGTCGTGCAACATGGTCGCGCGCGATGCGATCGGCGGCGCGGC GATGGACAAGGCGTTCCTGAAAGGATTGTCGATGACGAACGGCTCGACGAACCAGAAGGCCGCGGCGCAGGCGGTGCTGA CCGCGGCGGCGGCGCTCGGCTACAGCAGCGCGCAGCTCAATGCGATCGGCGACGCGTACAACAAGAGCTGCACGTACGGC GTGACCGTGCCGCAGAAGCTGTAA
Upstream 100 bases:
>100_bases CGGTTGCATCGGCCAGTCAAGGCCGGCGCACGGACCGGGTCGTCCCTGCGGTTCCCGTGGTTTCGTTTGTCATCCAAACC TTTGAAGACGAGGACAATCT
Downstream 100 bases:
>100_bases GCCGCACCTTGCTCATCGAGAAAAAGACGTAAGCGAGAACGACGCGGGGCGCGCGGCACGGTCTGCCGCGCGCCCGTCCC CTCGACTGCATCTCCCCTCA
Product: thermolysin metallopeptidase
Products: NA
Alternate protein names: Bacillolysin; Peptidase; Metallopeptidase Domain-Containing Protein
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Sequences:
>Translated_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL >Mature_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59840; Mature: 59840
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCHHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVSGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKALPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCHHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA