| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721450
Identifier: 53721450
GI number: 53721450
Start: 567424
End: 567849
Strand: Reverse
Name: 53721450
Synonym: BPSS0412
Alternate gene names: NA
Gene position: 567849-567424 (Counterclockwise)
Preceding gene: 53721453
Following gene: 53721449
Centisome position: 17.9
GC content: 62.44
Gene sequence:
>426_bases GTGCGGCACCGGGCGGGCTTCAAGCATCACGTGAAGCGCGGCGAGCACCCTACGGCAACTGCATCGGATCGCGAGCATTA CGCCGAGTTCGGCGACAAGATGAGCGCCGACGACGCGAAGCACGTCGAGACGGAATCGATCGAGGCGGCCGTGTTCCGCA AGGCCGTATGCGCCGGCTTCGATCACAAGAGGGTCGCCCTCGCGTTGATGAAGCGCGGCGGGCGCAGTGCCGCCAACCGC CGCACGCCGACATGCCAATCGGGCATGGCGGCCGATTCGCGGAATATTGGAGAAGCCCGGTGTGCTCGACGGCTTTGCTC ACAATCGCTCCTGTTTCCATGTCCACGTGGTGCACTTGAAACAGAGACTTTGCAAGGTCAATCGATAGTGACGAACTGCG CAGGTGGAGCCTACCAGTTCAGGTAG
Upstream 100 bases:
>100_bases CGCCCCGAACCCACTTCCGCCAACATAAGAGCCGCCGCCGATTTTCTCGGCGCGGTCCGCACCGCCATCACAAACGGCAC TTTCGATCAACCGGCCGAAC
Downstream 100 bases:
>100_bases TTTGACGGTTCGAGGCGCGTCTATATGATGAATTGGCCAACGAACGGGCGGACCGCGCCGCTCGGCTCGCGCCTGCACTC CAAAACCACCGCACGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRHRAGFKHHVKRGEHPTATASDREHYAEFGDKMSADDAKHVETESIEAAVFRKAVCAGFDHKRVALALMKRGGRSAANR RTPTCQSGMAADSRNIGEARCARRLCSQSLLFPCPRGALETETLQGQSIVTNCAGGAYQFR
Sequences:
>Translated_141_residues MRHRAGFKHHVKRGEHPTATASDREHYAEFGDKMSADDAKHVETESIEAAVFRKAVCAGFDHKRVALALMKRGGRSAANR RTPTCQSGMAADSRNIGEARCARRLCSQSLLFPCPRGALETETLQGQSIVTNCAGGAYQFR >Mature_141_residues MRHRAGFKHHVKRGEHPTATASDREHYAEFGDKMSADDAKHVETESIEAAVFRKAVCAGFDHKRVALALMKRGGRSAANR RTPTCQSGMAADSRNIGEARCARRLCSQSLLFPCPRGALETETLQGQSIVTNCAGGAYQFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15448; Mature: 15448
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRAGFKHHVKRGEHPTATASDREHYAEFGDKMSADDAKHVETESIEAAVFRKAVCAGF CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DHKRVALALMKRGGRSAANRRTPTCQSGMAADSRNIGEARCARRLCSQSLLFPCPRGALE CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TETLQGQSIVTNCAGGAYQFR CHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MRHRAGFKHHVKRGEHPTATASDREHYAEFGDKMSADDAKHVETESIEAAVFRKAVCAGF CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DHKRVALALMKRGGRSAANRRTPTCQSGMAADSRNIGEARCARRLCSQSLLFPCPRGALE CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TETLQGQSIVTNCAGGAYQFR CHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA