| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721449
Identifier: 53721449
GI number: 53721449
Start: 566615
End: 567391
Strand: Reverse
Name: 53721449
Synonym: BPSS0411
Alternate gene names: NA
Gene position: 567391-566615 (Counterclockwise)
Preceding gene: 53721450
Following gene: 53721448
Centisome position: 17.88
GC content: 60.23
Gene sequence:
>777_bases TTGGCCAACGAACGGGCGGACCGCGCCGCTCGGCTCGCGCCTGCACTCCAAAACCACCGCACGACCAAGACGAAGGAGAA ATCCATGGCGAAAGAGCTCAATGCGCCGTCTCAACAGGCACTCGTCACCAGCTTCACGATCAAACCGGAAGATGTCACCG GAACGCAGATCACGTACCGCTACGACACGATGCCGGGCAATCAGCCCAACGCGTACGGCAACACGGTTTTCATCTGGCAG ACGTCGCAGGTATTTATTCCGGTCAGCACCCAGCCGGCCCACTCGCAGATCGTCCAGAACAACCAGCCGAATGGCTCCAG CATATTCCAGGGGCTCTCGGTGAGCAGCGAGTCGTACCTGGTCGCATTCGCGGTGGGGAATTCGGTCAAGAATATCGTCG CCGCAGTGTTCGTCCCCTCTACGGACAGTAACCAGCCTCCGTACGACCCGGTGCAGGCTCCGTCGATCCTCGTCACCAAC AAAGGCTCGACGTCGGTGTCGTTCTCCTACGCGATGCCGGCGGGAATGACACCGCAAGCCGACGGCGACTGGGTGGGGTT GTGGCAAGGCCAAACCGAGGCAGTGCTTTACAACATGCCGGCCACCTGGTTCGTACAACTCGGGAGCAATAACAACGCGG GCAACTTCGGGATCAATCTGTCCAGCGGAAATATTCAGCGCGGCGTCACGTACACGCTGGGTTACTTCAAGGGCGGTTAC GCGCAGAGCAACCCGAAGCAGACCACGCTCGCAGCCAGCACGACCTTCGTGGGCTAA
Upstream 100 bases:
>100_bases AAACAGAGACTTTGCAAGGTCAATCGATAGTGACGAACTGCGCAGGTGGAGCCTACCAGTTCAGGTAGTTTGACGGTTCG AGGCGCGTCTATATGATGAA
Downstream 100 bases:
>100_bases ACGTGCGACGGCGCGCCGGGGTGAGTCTTAACGCGCCGGACAATACCTGCGCCGGATCAACTGCGTCCGGGAAGCGTTCC CTGCTCGCCCGGACGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MANERADRAARLAPALQNHRTTKTKEKSMAKELNAPSQQALVTSFTIKPEDVTGTQITYRYDTMPGNQPNAYGNTVFIWQ TSQVFIPVSTQPAHSQIVQNNQPNGSSIFQGLSVSSESYLVAFAVGNSVKNIVAAVFVPSTDSNQPPYDPVQAPSILVTN KGSTSVSFSYAMPAGMTPQADGDWVGLWQGQTEAVLYNMPATWFVQLGSNNNAGNFGINLSSGNIQRGVTYTLGYFKGGY AQSNPKQTTLAASTTFVG
Sequences:
>Translated_258_residues MANERADRAARLAPALQNHRTTKTKEKSMAKELNAPSQQALVTSFTIKPEDVTGTQITYRYDTMPGNQPNAYGNTVFIWQ TSQVFIPVSTQPAHSQIVQNNQPNGSSIFQGLSVSSESYLVAFAVGNSVKNIVAAVFVPSTDSNQPPYDPVQAPSILVTN KGSTSVSFSYAMPAGMTPQADGDWVGLWQGQTEAVLYNMPATWFVQLGSNNNAGNFGINLSSGNIQRGVTYTLGYFKGGY AQSNPKQTTLAASTTFVG >Mature_257_residues ANERADRAARLAPALQNHRTTKTKEKSMAKELNAPSQQALVTSFTIKPEDVTGTQITYRYDTMPGNQPNAYGNTVFIWQT SQVFIPVSTQPAHSQIVQNNQPNGSSIFQGLSVSSESYLVAFAVGNSVKNIVAAVFVPSTDSNQPPYDPVQAPSILVTNK GSTSVSFSYAMPAGMTPQADGDWVGLWQGQTEAVLYNMPATWFVQLGSNNNAGNFGINLSSGNIQRGVTYTLGYFKGGYA QSNPKQTTLAASTTFVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27690; Mature: 27559
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANERADRAARLAPALQNHRTTKTKEKSMAKELNAPSQQALVTSFTIKPEDVTGTQITYR CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCEEEEE YDTMPGNQPNAYGNTVFIWQTSQVFIPVSTQPAHSQIVQNNQPNGSSIFQGLSVSSESYL EECCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCEE VAFAVGNSVKNIVAAVFVPSTDSNQPPYDPVQAPSILVTNKGSTSVSFSYAMPAGMTPQA EEEEECCCHHCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DGDWVGLWQGQTEAVLYNMPATWFVQLGSNNNAGNFGINLSSGNIQRGVTYTLGYFKGGY CCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEECCCC AQSNPKQTTLAASTTFVG CCCCCCCEEEEEEEEECC >Mature Secondary Structure ANERADRAARLAPALQNHRTTKTKEKSMAKELNAPSQQALVTSFTIKPEDVTGTQITYR CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCEEEEE YDTMPGNQPNAYGNTVFIWQTSQVFIPVSTQPAHSQIVQNNQPNGSSIFQGLSVSSESYL EECCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCEE VAFAVGNSVKNIVAAVFVPSTDSNQPPYDPVQAPSILVTNKGSTSVSFSYAMPAGMTPQA EEEEECCCHHCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC DGDWVGLWQGQTEAVLYNMPATWFVQLGSNNNAGNFGINLSSGNIQRGVTYTLGYFKGGY CCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEECCCC AQSNPKQTTLAASTTFVG CCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA