| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yhhW [C]
Identifier: 53721399
GI number: 53721399
Start: 504313
End: 505185
Strand: Reverse
Name: yhhW [C]
Synonym: BPSS0364
Alternate gene names: 53721399
Gene position: 505185-504313 (Counterclockwise)
Preceding gene: 53721401
Following gene: 53721398
Centisome position: 15.92
GC content: 68.27
Gene sequence:
>873_bases ATGACTATCGCCCGCTCGATCCAGCGTACCTACCCGGCGCACCGCACGACGGAAGGCGGCGGCTTCGTGGTTCACCGTCC GTTTCCGACCCGCCTGCTGACGGATTTCGATCCGTTCCTGTTGCTCGACGAAATGGGGCCCGTCGATTACGCGCCGAACG ATGCGAAAGGCGCGCCCGATCATCCGCACCGTGGCTTCGAAACGGTGACGTACGTGCTGGAAGGCTGGTTTCGCCATCGC GATTCGGCGGGACACGCCGGCGCGCTCGGCCCGGGCGACGTCCAATGGATGACGGCGGGCGCCGGTGTCGTTCACAGCGA AATGCCCGATCCCGAATTCGCGCGCCGGGGCGGCCGCGCGCACGCATTCCAGCTCTGGGTGAACCTGCCGCGCCGCGACA AGATGATCGCGCCGCGCTATCAGGACATTCCGGCCGCGCGCATCCCGAGCGCCAAGTCGCCGGATGGCCGCGCGAAAGTG CGGGTGATCGCCGGCGAGGCGTTCGGCGCATGCGCGACGATCGAAACGCGCACCCCGATGCTGTATCTGCACTTCACGCT ATCGCCCGGCGCGGTCGTCGAGCAGCCGGTGCCGGCCGGCTTTCGCGTGTTCGCGTATCCGTTCGAGGGCGGCGGATTCT ACGGCGGGGACAGGGAGGCAGTCGACGCCCGGCATGTCGTCGTGTACGCGGAAGACGGCGATACCGCCGTGATCGCCGCG GGCGAGGCGCCGCTCGATTTGCTGCTGATCGGCGGCGCGCCGCTCAACGAGCCGATCGTGCGCTACGGCCCGTTCGTGAT GAACACCGAGGACGAGATCCGCGAAGCGGTCGCCGATTATCAGACGGGGCGGATGGGCCGCATCTCCGCCTGA
Upstream 100 bases:
>100_bases GATCCATTGCGAATCGAGCGGATTTAATCGGCAATTCGCTCAATATAATAGCCTTGCGTTGCAAAAATAACGCTATTTCC CGTCACTCCAAGAGCCTCCC
Downstream 100 bases:
>100_bases ACGCCGTCCGCGCCGTTGGCCGAACGGCGAAGGGGGAAGCTCCGCCGCCGCTGCGGATTTGCGTCACAATATCTGTTCGC GCCCGGCATGGGCCGCACTA
Product: chromosome condensation protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA3240 [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTIARSIQRTYPAHRTTEGGGFVVHRPFPTRLLTDFDPFLLLDEMGPVDYAPNDAKGAPDHPHRGFETVTYVLEGWFRHR DSAGHAGALGPGDVQWMTAGAGVVHSEMPDPEFARRGGRAHAFQLWVNLPRRDKMIAPRYQDIPAARIPSAKSPDGRAKV RVIAGEAFGACATIETRTPMLYLHFTLSPGAVVEQPVPAGFRVFAYPFEGGGFYGGDREAVDARHVVVYAEDGDTAVIAA GEAPLDLLLIGGAPLNEPIVRYGPFVMNTEDEIREAVADYQTGRMGRISA
Sequences:
>Translated_290_residues MTIARSIQRTYPAHRTTEGGGFVVHRPFPTRLLTDFDPFLLLDEMGPVDYAPNDAKGAPDHPHRGFETVTYVLEGWFRHR DSAGHAGALGPGDVQWMTAGAGVVHSEMPDPEFARRGGRAHAFQLWVNLPRRDKMIAPRYQDIPAARIPSAKSPDGRAKV RVIAGEAFGACATIETRTPMLYLHFTLSPGAVVEQPVPAGFRVFAYPFEGGGFYGGDREAVDARHVVVYAEDGDTAVIAA GEAPLDLLLIGGAPLNEPIVRYGPFVMNTEDEIREAVADYQTGRMGRISA >Mature_289_residues TIARSIQRTYPAHRTTEGGGFVVHRPFPTRLLTDFDPFLLLDEMGPVDYAPNDAKGAPDHPHRGFETVTYVLEGWFRHRD SAGHAGALGPGDVQWMTAGAGVVHSEMPDPEFARRGGRAHAFQLWVNLPRRDKMIAPRYQDIPAARIPSAKSPDGRAKVR VIAGEAFGACATIETRTPMLYLHFTLSPGAVVEQPVPAGFRVFAYPFEGGGFYGGDREAVDARHVVVYAEDGDTAVIAAG EAPLDLLLIGGAPLNEPIVRYGPFVMNTEDEIREAVADYQTGRMGRISA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=289, Percent_Identity=41.1764705882353, Blast_Score=217, Evalue=9e-57, Organism=Homo sapiens, GI4505823, Length=289, Percent_Identity=41.1764705882353, Blast_Score=217, Evalue=9e-57, Organism=Escherichia coli, GI1789847, Length=86, Percent_Identity=39.5348837209302, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31566; Mature: 31435
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIARSIQRTYPAHRTTEGGGFVVHRPFPTRLLTDFDPFLLLDEMGPVDYAPNDAKGAPD CCHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYVLEGWFRHRDSAGHAGALGPGDVQWMTAGAGVVHSEMPDPEFARRGGRA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCC HAFQLWVNLPRRDKMIAPRYQDIPAARIPSAKSPDGRAKVRVIAGEAFGACATIETRTPM EEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCE LYLHFTLSPGAVVEQPVPAGFRVFAYPFEGGGFYGGDREAVDARHVVVYAEDGDTAVIAA EEEEEEECCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEE GEAPLDLLLIGGAPLNEPIVRYGPFVMNTEDEIREAVADYQTGRMGRISA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TIARSIQRTYPAHRTTEGGGFVVHRPFPTRLLTDFDPFLLLDEMGPVDYAPNDAKGAPD CHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYVLEGWFRHRDSAGHAGALGPGDVQWMTAGAGVVHSEMPDPEFARRGGRA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCC HAFQLWVNLPRRDKMIAPRYQDIPAARIPSAKSPDGRAKVRVIAGEAFGACATIETRTPM EEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCE LYLHFTLSPGAVVEQPVPAGFRVFAYPFEGGGFYGGDREAVDARHVVVYAEDGDTAVIAA EEEEEEECCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEE GEAPLDLLLIGGAPLNEPIVRYGPFVMNTEDEIREAVADYQTGRMGRISA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]