| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721345
Identifier: 53721345
GI number: 53721345
Start: 428238
End: 428756
Strand: Reverse
Name: 53721345
Synonym: BPSS0310
Alternate gene names: NA
Gene position: 428756-428238 (Counterclockwise)
Preceding gene: 53721346
Following gene: 53721344
Centisome position: 13.51
GC content: 66.47
Gene sequence:
>519_bases ATGACGATTACCCTCATCGAACCTGTCCAGCAGCGCACGGGGATCTATCCGTCGTCCGACCTGAAGGTCGAGGACGGCTA TCCGTCGTCCGACACGTTCCAGATCATTCAGACGCAGGACGGCCGCGGCGCCGGCGTCCGCGTCCTGAAGGCGTTCGCGC GCGGGCGGCGGATGGCGCGCGTGTCCGGGCAGATCACCGCGTTCTGCCGGCTGCACACGCTGCAGATCAACGCGCACACG CACCTGTACGACCCGCATTTCAGCGGGCTGCTGCTGCATTCGTGCGATCCGAACGTGCGGCTCGACATGGCGGGCTTCGA GCTCTGGTCACTGCGCGACATCGCGGCGGGCGAGATGCTGACGATGGATTACGCATCGACCGAGGACGTGCTGATGCGCC AGTTCGAATGCCACTGCGGCGCGCCGAACTGCCGGCGCTGGATCACGGGCGCGAAGGAACTGCCGAACGATAGCGGGCAA ACGCTCCTCGCCGGGTTGCGGGCCGCCGAGATCGCATGA
Upstream 100 bases:
>100_bases GATCCGCCCTTCCCGTCACCCGCGCATTCCGACGCGGCCGCAAAAAAGAGGTCTACCGGGTGCTCCCGCCCGGCGCACGA ACTCAGTCAAGGAGAGCAGC
Downstream 100 bases:
>100_bases CGCGATCGCGGGTGCGCGGGTGCGCGGGTGCGCAGGTCGCAGGTCGCAGGTCGCAGGTCGCAGGTCGCGGGTCGCTGATC GCTGATCGTGGATCGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHT HLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQ TLLAGLRAAEIA
Sequences:
>Translated_172_residues MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHT HLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQ TLLAGLRAAEIA >Mature_171_residues TITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMARVSGQITAFCRLHTLQINAHTH LYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEMLTMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQT LLAGLRAAEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19094; Mature: 18963
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50280 SET ; PS50868 POST_SET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMAR CEEEEECCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE VSGQITAFCRLHTLQINAHTHLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEML CCCCEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCEEEECCCCCCCCEE TMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQTLLAGLRAAEIA EEECCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TITLIEPVQQRTGIYPSSDLKVEDGYPSSDTFQIIQTQDGRGAGVRVLKAFARGRRMAR EEEEECCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEE VSGQITAFCRLHTLQINAHTHLYDPHFSGLLLHSCDPNVRLDMAGFELWSLRDIAAGEML CCCCEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCEEEECCCCCCCCEE TMDYASTEDVLMRQFECHCGAPNCRRWITGAKELPNDSGQTLLAGLRAAEIA EEECCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA