Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53721344

Identifier: 53721344

GI number: 53721344

Start: 426161

End: 427240

Strand: Reverse

Name: 53721344

Synonym: BPSS0309

Alternate gene names: NA

Gene position: 427240-426161 (Counterclockwise)

Preceding gene: 53721345

Following gene: 53721343

Centisome position: 13.46

GC content: 71.85

Gene sequence:

>1080_bases
GTGCGTGACCGCGCGCCGCGCCGCCCGCTTCATCAATACAAGGAGAAACGCGCCATGGATAGCTTCATCGAACTGCAGGA
AAACGACCGTCGCCAGGTGCCCGTGCGCGGCCGCGCGTACCTCGCCGGCGCCGACAGCCCGCTCGTGCCGGTGACGATCC
CGATCGCGAACGATCTCGCGCTCGGGCTTGCGCAGGCCGCCGCCACGCCCGCCGAAGCCGCCGCGCTCTGCCGCGACGCG
ATCGACGCGCGGCTGCCCGCCACGGGCGCGCTGCTGTTTCGCGGGCTGCCGATCGCGGACCGCGCGGGCTTCGACACGTT
CATGCGCGCGCTCGGCTACGCGCCGCGCAGCTACGACGGCGGCATCGCGGTGCGCGCGCGCGACGCCGGCTACGCGCTCG
TCGCGAGCCAGGAAGACCCGCGCATCACGATGGCGCCGCACAACGAGATGGCGTATCTGCCGAACCCGCCGCGCAAGGTG
TTCTTCTTCTGCGCGGCGGCCGCCGACGAAGGCGGCGAAGTGCCGATCAACGACGTCCGGCTCGCGGCCGCGCAGATCCC
CGACGAAGTGCTCGCGCAGTTCGAGCGCAAGCGGATCGGCTATCACCGCCATCTGCCGCGCGAATCGACGCCCACGCAGA
TCGGCTGGACCGACACGTTCGGCGTGCGCGAGCGCGACGCCGTCGATGCGCTGATGCGCGACAAGGGCTACGAGCACCGC
TGGCTCGACGGCGACGGCCTCGGCTACGGCTACGTGCACGACGCGTTCCTCGACGATCCCGCGGGCGGCGCGCCGCTGTG
GTTCAACCAGGTGACGGAGCTGCACGCGTCGTACTGGCGCAGCCACCCGCTCTTCCCGTCCGACTGGGACGACGCGCGCT
ATCCGGCGACCACGACATACGGCGACGGCGAGCCGATCGACCCCGAGCTCGTCACGAAGCTGCGCGCGGCGCTGTGGCGC
ACGTCGCGCGCGGTCGCGATGCGCCCGGGCGACGTGCTCGTGCTCGACAACGTCTACGTGCAGCACGGCCGCTTCGCGTT
CTCCGGGCCGCGCCTGCATCTCGTCAGCCTGACCGACTGA

Upstream 100 bases:

>100_bases
CGGACGTCTGCGCCGCCTGCGCCACCGCCGCGCCGCTCCGACAGGCGATGCGCCGCGCCGCCGTCCCGATCGCGCGCCCC
CGCCATCGCGGGCCGCCGGC

Downstream 100 bases:

>100_bases
GGCAACACATGGCATACCGAAACGATTCCCTTCTCACGAGCGCGCAGCAGGACACGCGGCATCTGCTGCACCCGTGGGCC
GACCTGTCCGCGCTCGGCCG

Product: peptide synthase regulatory protein

Products: NA

Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA
IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV
FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR
WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR
TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD

Sequences:

>Translated_359_residues
MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA
IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV
FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR
WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR
TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD
>Mature_359_residues
MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA
IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV
FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR
WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR
TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39831; Mature: 39831

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHH
LGLAQAAATPAEAAALCRDAIDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCHHHHHHHHCCCCCCCCC
GIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKVFFFCAAAADEGGEVPINDVR
CEEEEEECCCEEEEECCCCCEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCHHHHH
LAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR
HHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTY
EECCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GDGEPIDPELVTKLRAALWRTSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD
CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEECCCEEECCCEEEEEEECC
>Mature Secondary Structure
MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHH
LGLAQAAATPAEAAALCRDAIDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCHHHHHHHHCCCCCCCCC
GIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKVFFFCAAAADEGGEVPINDVR
CEEEEEECCCEEEEECCCCCEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCHHHHH
LAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR
HHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTY
EECCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GDGEPIDPELVTKLRAALWRTSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD
CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEECCCEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA