| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721344
Identifier: 53721344
GI number: 53721344
Start: 426161
End: 427240
Strand: Reverse
Name: 53721344
Synonym: BPSS0309
Alternate gene names: NA
Gene position: 427240-426161 (Counterclockwise)
Preceding gene: 53721345
Following gene: 53721343
Centisome position: 13.46
GC content: 71.85
Gene sequence:
>1080_bases GTGCGTGACCGCGCGCCGCGCCGCCCGCTTCATCAATACAAGGAGAAACGCGCCATGGATAGCTTCATCGAACTGCAGGA AAACGACCGTCGCCAGGTGCCCGTGCGCGGCCGCGCGTACCTCGCCGGCGCCGACAGCCCGCTCGTGCCGGTGACGATCC CGATCGCGAACGATCTCGCGCTCGGGCTTGCGCAGGCCGCCGCCACGCCCGCCGAAGCCGCCGCGCTCTGCCGCGACGCG ATCGACGCGCGGCTGCCCGCCACGGGCGCGCTGCTGTTTCGCGGGCTGCCGATCGCGGACCGCGCGGGCTTCGACACGTT CATGCGCGCGCTCGGCTACGCGCCGCGCAGCTACGACGGCGGCATCGCGGTGCGCGCGCGCGACGCCGGCTACGCGCTCG TCGCGAGCCAGGAAGACCCGCGCATCACGATGGCGCCGCACAACGAGATGGCGTATCTGCCGAACCCGCCGCGCAAGGTG TTCTTCTTCTGCGCGGCGGCCGCCGACGAAGGCGGCGAAGTGCCGATCAACGACGTCCGGCTCGCGGCCGCGCAGATCCC CGACGAAGTGCTCGCGCAGTTCGAGCGCAAGCGGATCGGCTATCACCGCCATCTGCCGCGCGAATCGACGCCCACGCAGA TCGGCTGGACCGACACGTTCGGCGTGCGCGAGCGCGACGCCGTCGATGCGCTGATGCGCGACAAGGGCTACGAGCACCGC TGGCTCGACGGCGACGGCCTCGGCTACGGCTACGTGCACGACGCGTTCCTCGACGATCCCGCGGGCGGCGCGCCGCTGTG GTTCAACCAGGTGACGGAGCTGCACGCGTCGTACTGGCGCAGCCACCCGCTCTTCCCGTCCGACTGGGACGACGCGCGCT ATCCGGCGACCACGACATACGGCGACGGCGAGCCGATCGACCCCGAGCTCGTCACGAAGCTGCGCGCGGCGCTGTGGCGC ACGTCGCGCGCGGTCGCGATGCGCCCGGGCGACGTGCTCGTGCTCGACAACGTCTACGTGCAGCACGGCCGCTTCGCGTT CTCCGGGCCGCGCCTGCATCTCGTCAGCCTGACCGACTGA
Upstream 100 bases:
>100_bases CGGACGTCTGCGCCGCCTGCGCCACCGCCGCGCCGCTCCGACAGGCGATGCGCCGCGCCGCCGTCCCGATCGCGCGCCCC CGCCATCGCGGGCCGCCGGC
Downstream 100 bases:
>100_bases GGCAACACATGGCATACCGAAACGATTCCCTTCTCACGAGCGCGCAGCAGGACACGCGGCATCTGCTGCACCCGTGGGCC GACCTGTCCGCGCTCGGCCG
Product: peptide synthase regulatory protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD
Sequences:
>Translated_359_residues MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD >Mature_359_residues MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLALGLAQAAATPAEAAALCRDA IDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDGGIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKV FFFCAAAADEGGEVPINDVRLAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTYGDGEPIDPELVTKLRAALWR TSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39831; Mature: 39831
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHH LGLAQAAATPAEAAALCRDAIDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDG HHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCHHHHHHHHCCCCCCCCC GIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKVFFFCAAAADEGGEVPINDVR CEEEEEECCCEEEEECCCCCEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCHHHHH LAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR HHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTY EECCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GDGEPIDPELVTKLRAALWRTSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEECCCEEECCCEEEEEEECC >Mature Secondary Structure MRDRAPRRPLHQYKEKRAMDSFIELQENDRRQVPVRGRAYLAGADSPLVPVTIPIANDLA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHH LGLAQAAATPAEAAALCRDAIDARLPATGALLFRGLPIADRAGFDTFMRALGYAPRSYDG HHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHCCHHHHHHHHCCCCCCCCC GIAVRARDAGYALVASQEDPRITMAPHNEMAYLPNPPRKVFFFCAAAADEGGEVPINDVR CEEEEEECCCEEEEECCCCCEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCHHHHH LAAAQIPDEVLAQFERKRIGYHRHLPRESTPTQIGWTDTFGVRERDAVDALMRDKGYEHR HHHHHCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE WLDGDGLGYGYVHDAFLDDPAGGAPLWFNQVTELHASYWRSHPLFPSDWDDARYPATTTY EECCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GDGEPIDPELVTKLRAALWRTSRAVAMRPGDVLVLDNVYVQHGRFAFSGPRLHLVSLTD CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEECCCEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA