Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53721020

Identifier: 53721020

GI number: 53721020

Start: 4053013

End: 4054248

Strand: Reverse

Name: 53721020

Synonym: BPSL3413

Alternate gene names: NA

Gene position: 4054248-4053013 (Counterclockwise)

Preceding gene: 53721021

Following gene: 53721019

Centisome position: 99.5

GC content: 69.74

Gene sequence:

>1236_bases
TTGTCGCGCGCGCAACGCGTCCGCTACACTCGCCGTTCGCCGACCCGTTGGTCGGGGAACGGCCGAGCGCGAGACACGGA
GACGAACTCGATGATAGGAGCGGGGCGGTTCTGGGGAATCGGTACGGCGAACGCATGGGCGGCCGTTTCGGGCGTCGCGT
TCGCGGAGGCCAGGACCGACTTCGCCGCTTGCTCCGATGCTGCCTCCGCTCGCTTTGCCGCACCGCCGAGCCTCCGCGCG
AAGGATGCGATCGCGTTGCCGCCGCGCGAAATCGACAGGTGGGCAACGCGCGCCGTTGAACTCGACGATGCGGCCGATTC
GGCCCGCGTGCCCAACGGCGCTTACTCACACCCGAGCGAAAATCACCTCGATGCGCCGATCGGCTCGGCCGTCTCCACAC
GTTCGTCCGCAATGGGCGGCACGGCCGCGCGCTTGCCCGCTCGGGCGATGTCCTCGATGGCGACAGCTTCGGGTCTCGAA
TCGTTCGATGCAAAGCGCGCCTTTCGGGGCTTTGAAACACGACCACGCGATCTCTCTGCATCGGCTGCGATCGCCAGGCA
CGGCTTCGCGACGCGCGACAGGAAGACGATTGCCCCCGCCGGGCTGGACGCGGCATGCGGCGGGAGCGCGCTGGTGCAAG
TCGGCGGCGCGTCGGTGGTTAAACGGATCGTGTTTGCCGAGGCTGGGCGGCGCGTGTGCGGCGATGCGTCGGTGGGGCCT
TGGGCATCGCGCGCGCCATCGAAGTGGCCCGATGCCGTGACGCCGCATGCGGGCCCAGGTGCCCGCATGCTCGGCGCGCT
ATCGCTCGAGACGCCGGCTGCGCGGTCGGCGTGCTGCGATGCCGGCGCGACTTGCCGGCGGGCGCACGGCGCGGCGATCG
AAGGTCTCCGGCATGCACACGGCGCAGGCGGCGGCGGGGCGCGTCGGCCCGCCGGCTTGGCCCTTGTCGTCGATGCGTTT
CTCACCGATTCCAGTTTCAATTCGTTATTCGCGCCTGTGTTCCGGCTCGCGTATGAAGATGCGCACGACGCCGGCACGAC
GCCGACGACCGGCGAGCATGCGCGGAGTGCCGCGCCGCTTTCTGCTCACGGGGTGCGGGGCGCATCGAATCGCAGCAGGC
TCGGCATGCCGGTGTTTCGCCGCGCGTCGCCCACGTGGTGCGATGGCGCGACCGATGTTGCCGGCGTGTGCCGCGTATTC
GACCGACATGCTGGCTTGGGCGAAGCGTTCGCGTGA

Upstream 100 bases:

>100_bases
GGCGGTGTACATATCGCTTTCGCTAAACGCGGTTTATCACGCCGCCTTCGATTGCCGCCCGCTTGCGCCGGCCGGCGCGC
ATCGCTGCGGGCTAACCCGG

Downstream 100 bases:

>100_bases
CGGCAGGCATCGTCGGCGTTTTGAGCGGAACACCCGCTCGGGATCGACGGTAACGCATGGCGACGGCGGCGGCGATACGG
GCGGCCGGCCGCGTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRA
KDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLE
SFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP
WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAF
LTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVF
DRHAGLGEAFA

Sequences:

>Translated_411_residues
MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRA
KDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLE
SFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP
WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAF
LTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVF
DRHAGLGEAFA
>Mature_410_residues
SRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRAK
DAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLES
FDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGPW
ASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAFL
TDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFD
RHAGLGEAFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42460; Mature: 42328

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
FAACSDAASARFAAPPSLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSE
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
NHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSA
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCCC
WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAH
CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GAGGGGARRPAGLALVVDAFLTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPL
CCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
SAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFDRHAGLGEAFA
HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTD
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
FAACSDAASARFAAPPSLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSE
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
NHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSA
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCCC
WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAH
CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GAGGGGARRPAGLALVVDAFLTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPL
CCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
SAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFDRHAGLGEAFA
HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA