| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53721020
Identifier: 53721020
GI number: 53721020
Start: 4053013
End: 4054248
Strand: Reverse
Name: 53721020
Synonym: BPSL3413
Alternate gene names: NA
Gene position: 4054248-4053013 (Counterclockwise)
Preceding gene: 53721021
Following gene: 53721019
Centisome position: 99.5
GC content: 69.74
Gene sequence:
>1236_bases TTGTCGCGCGCGCAACGCGTCCGCTACACTCGCCGTTCGCCGACCCGTTGGTCGGGGAACGGCCGAGCGCGAGACACGGA GACGAACTCGATGATAGGAGCGGGGCGGTTCTGGGGAATCGGTACGGCGAACGCATGGGCGGCCGTTTCGGGCGTCGCGT TCGCGGAGGCCAGGACCGACTTCGCCGCTTGCTCCGATGCTGCCTCCGCTCGCTTTGCCGCACCGCCGAGCCTCCGCGCG AAGGATGCGATCGCGTTGCCGCCGCGCGAAATCGACAGGTGGGCAACGCGCGCCGTTGAACTCGACGATGCGGCCGATTC GGCCCGCGTGCCCAACGGCGCTTACTCACACCCGAGCGAAAATCACCTCGATGCGCCGATCGGCTCGGCCGTCTCCACAC GTTCGTCCGCAATGGGCGGCACGGCCGCGCGCTTGCCCGCTCGGGCGATGTCCTCGATGGCGACAGCTTCGGGTCTCGAA TCGTTCGATGCAAAGCGCGCCTTTCGGGGCTTTGAAACACGACCACGCGATCTCTCTGCATCGGCTGCGATCGCCAGGCA CGGCTTCGCGACGCGCGACAGGAAGACGATTGCCCCCGCCGGGCTGGACGCGGCATGCGGCGGGAGCGCGCTGGTGCAAG TCGGCGGCGCGTCGGTGGTTAAACGGATCGTGTTTGCCGAGGCTGGGCGGCGCGTGTGCGGCGATGCGTCGGTGGGGCCT TGGGCATCGCGCGCGCCATCGAAGTGGCCCGATGCCGTGACGCCGCATGCGGGCCCAGGTGCCCGCATGCTCGGCGCGCT ATCGCTCGAGACGCCGGCTGCGCGGTCGGCGTGCTGCGATGCCGGCGCGACTTGCCGGCGGGCGCACGGCGCGGCGATCG AAGGTCTCCGGCATGCACACGGCGCAGGCGGCGGCGGGGCGCGTCGGCCCGCCGGCTTGGCCCTTGTCGTCGATGCGTTT CTCACCGATTCCAGTTTCAATTCGTTATTCGCGCCTGTGTTCCGGCTCGCGTATGAAGATGCGCACGACGCCGGCACGAC GCCGACGACCGGCGAGCATGCGCGGAGTGCCGCGCCGCTTTCTGCTCACGGGGTGCGGGGCGCATCGAATCGCAGCAGGC TCGGCATGCCGGTGTTTCGCCGCGCGTCGCCCACGTGGTGCGATGGCGCGACCGATGTTGCCGGCGTGTGCCGCGTATTC GACCGACATGCTGGCTTGGGCGAAGCGTTCGCGTGA
Upstream 100 bases:
>100_bases GGCGGTGTACATATCGCTTTCGCTAAACGCGGTTTATCACGCCGCCTTCGATTGCCGCCCGCTTGCGCCGGCCGGCGCGC ATCGCTGCGGGCTAACCCGG
Downstream 100 bases:
>100_bases CGGCAGGCATCGTCGGCGTTTTGAGCGGAACACCCGCTCGGGATCGACGGTAACGCATGGCGACGGCGGCGGCGATACGG GCGGCCGGCCGCGTTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRA KDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLE SFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAF LTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVF DRHAGLGEAFA
Sequences:
>Translated_411_residues MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRA KDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLE SFDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAF LTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVF DRHAGLGEAFA >Mature_410_residues SRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTDFAACSDAASARFAAPPSLRAK DAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSENHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLES FDAKRAFRGFETRPRDLSASAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGPW ASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAHGAGGGGARRPAGLALVVDAFL TDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPLSAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFD RHAGLGEAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42460; Mature: 42328
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTD CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH FAACSDAASARFAAPPSLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSE HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCCC WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAH CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC GAGGGGARRPAGLALVVDAFLTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPL CCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC SAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFDRHAGLGEAFA HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRAQRVRYTRRSPTRWSGNGRARDTETNSMIGAGRFWGIGTANAWAAVSGVAFAEARTD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH FAACSDAASARFAAPPSLRAKDAIALPPREIDRWATRAVELDDAADSARVPNGAYSHPSE HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NHLDAPIGSAVSTRSSAMGGTAARLPARAMSSMATASGLESFDAKRAFRGFETRPRDLSA CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SAAIARHGFATRDRKTIAPAGLDAACGGSALVQVGGASVVKRIVFAEAGRRVCGDASVGP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCHHCCCCCCCC WASRAPSKWPDAVTPHAGPGARMLGALSLETPAARSACCDAGATCRRAHGAAIEGLRHAH CCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC GAGGGGARRPAGLALVVDAFLTDSSFNSLFAPVFRLAYEDAHDAGTTPTTGEHARSAAPL CCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC SAHGVRGASNRSRLGMPVFRRASPTWCDGATDVAGVCRVFDRHAGLGEAFA HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA