| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720955
Identifier: 53720955
GI number: 53720955
Start: 3967732
End: 3968511
Strand: Reverse
Name: 53720955
Synonym: BPSL3345
Alternate gene names: NA
Gene position: 3968511-3967732 (Counterclockwise)
Preceding gene: 53720956
Following gene: 53720954
Centisome position: 97.4
GC content: 62.18
Gene sequence:
>780_bases ATGCACGACGCAAGTATAGGCGACTTCTCGCCGTTCCGTAGAGAGTGGGTGATCCGTGGCCGGAATTTCGGTGACGGGCA GGTCGAAGTGACGGCGACGCGGTTTGATCGGTACATGGGCGCACTGTCGTTGAACGCGAGGCCCAAGGCGAAACGCGGGG AGTCGGAGAACAGTGAATCGAACCTGCTCGATGCGGCGAAGCGTGCCAAGCAGCAGGTGCGGCTACGGTGTAAGGCGATT GGAGCGGATCGAATGATCACGTTGACGTACCGCGAGAACATGCAGGACAAAGCCCGCCTGAAGCGTGATTTCGACGCGCT GCGCCGGCGTCTCGCGAAGCTGTCGACCTTCCAGTATGTCGCCACACCGGAGCGCCAGAAGCGGGGCGCGTGGCACCTCC ATGTGGCCGTCAGGGGGCGCCAGAATTACCGCGTGCTGCGCTCGATCTGGCAAAGCATCGTAGGCGTTGGGAACGGCCAG ATCAACGTCCGGAACCCGTTCAAGGAGCGGGGCCTGCGGCACAAGCTCGCGGCCTACCTGGCGAAGTACATCACGAAGGA TTTCGCGGAACACGCGCTGAACGAAAAGCGGTACTGGACAAGCCGCGGCGTCGTCGTCCCGGAGGTTATGCCGATCGATC ACATTGCCGCCAATGATCCGGCGGAAGCCCTGAAGATTGCGTTCAAGGCGGCTTTGCAGGCGGGCGCGACGCTCGATCGC TGTCAGGCGTTCTGGCGGCAGGAGTTGGGCGTGTTCTGGTTATCGACGCGCGAGAATTAG
Upstream 100 bases:
>100_bases AGGCGGAGCAAGGACAGAAAGGCAGCTCGGAAAAAAGAAAAGCCCTGAACGCTGGCACGGTCAGGGCTTGGTGAAACAGC GCATTACAAGGGTGATTGCA
Downstream 100 bases:
>100_bases GCCAATGTTGTAAATAGATTTAAGCATAGAATCGTAACTGTCGATATTCTGATGATTCAATAGCGCTAGAGGCGTTTGGA ATGACATTTGAGGAAATCGT
Product: putative bacteriophage-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MHDASIGDFSPFRREWVIRGRNFGDGQVEVTATRFDRYMGALSLNARPKAKRGESENSESNLLDAAKRAKQQVRLRCKAI GADRMITLTYRENMQDKARLKRDFDALRRRLAKLSTFQYVATPERQKRGAWHLHVAVRGRQNYRVLRSIWQSIVGVGNGQ INVRNPFKERGLRHKLAAYLAKYITKDFAEHALNEKRYWTSRGVVVPEVMPIDHIAANDPAEALKIAFKAALQAGATLDR CQAFWRQELGVFWLSTREN
Sequences:
>Translated_259_residues MHDASIGDFSPFRREWVIRGRNFGDGQVEVTATRFDRYMGALSLNARPKAKRGESENSESNLLDAAKRAKQQVRLRCKAI GADRMITLTYRENMQDKARLKRDFDALRRRLAKLSTFQYVATPERQKRGAWHLHVAVRGRQNYRVLRSIWQSIVGVGNGQ INVRNPFKERGLRHKLAAYLAKYITKDFAEHALNEKRYWTSRGVVVPEVMPIDHIAANDPAEALKIAFKAALQAGATLDR CQAFWRQELGVFWLSTREN >Mature_259_residues MHDASIGDFSPFRREWVIRGRNFGDGQVEVTATRFDRYMGALSLNARPKAKRGESENSESNLLDAAKRAKQQVRLRCKAI GADRMITLTYRENMQDKARLKRDFDALRRRLAKLSTFQYVATPERQKRGAWHLHVAVRGRQNYRVLRSIWQSIVGVGNGQ INVRNPFKERGLRHKLAAYLAKYITKDFAEHALNEKRYWTSRGVVVPEVMPIDHIAANDPAEALKIAFKAALQAGATLDR CQAFWRQELGVFWLSTREN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29814; Mature: 29814
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDASIGDFSPFRREWVIRGRNFGDGQVEVTATRFDRYMGALSLNARPKAKRGESENSES CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHH NLLDAAKRAKQQVRLRCKAIGADRMITLTYRENMQDKARLKRDFDALRRRLAKLSTFQYV HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHE ATPERQKRGAWHLHVAVRGRQNYRVLRSIWQSIVGVGNGQINVRNPFKERGLRHKLAAYL ECCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHH AKYITKDFAEHALNEKRYWTSRGVVVPEVMPIDHIAANDPAEALKIAFKAALQAGATLDR HHHHHHHHHHHHHCHHHEECCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHH CQAFWRQELGVFWLSTREN HHHHHHHHCCEEEEEECCC >Mature Secondary Structure MHDASIGDFSPFRREWVIRGRNFGDGQVEVTATRFDRYMGALSLNARPKAKRGESENSES CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHH NLLDAAKRAKQQVRLRCKAIGADRMITLTYRENMQDKARLKRDFDALRRRLAKLSTFQYV HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHE ATPERQKRGAWHLHVAVRGRQNYRVLRSIWQSIVGVGNGQINVRNPFKERGLRHKLAAYL ECCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHH AKYITKDFAEHALNEKRYWTSRGVVVPEVMPIDHIAANDPAEALKIAFKAALQAGATLDR HHHHHHHHHHHHHCHHHEECCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHH CQAFWRQELGVFWLSTREN HHHHHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA