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The map label for this gene is tse [H]

Identifier: 53720948

GI number: 53720948

Start: 3958328

End: 3960145

Strand: Reverse

Name: tse [H]

Synonym: BPSL3338

Alternate gene names: 53720948

Gene position: 3960145-3958328 (Counterclockwise)

Preceding gene: 53720949

Following gene: 53720946

Centisome position: 97.19

GC content: 68.76

Gene sequence:

>1818_bases
ATGTCGCCCTTCATGCTCTCCTCGATCCGGTCCCGCATTCTCGTCGCGTGCCTTGCCATCGTCATCGGCTCGCTCGTCAT
CAACACGGCGCTCAACTATTTCGTCGCCAACCGCTATAACCGCGAGTCCATCAGCCAGAACCTCAGCGCGGTGCTGACCG
GCCACGAAGCCGGCATCGCCGATTGGGTCGCGTCGAAGACGCAGATGATCGTGTCGGTCGAAGACGCCGCGATCTCGCCG
GATCCGATTCCGGCGCTCAAGCAGATCGCCGCCGCCGGCGGGTTCACCAATGTCTATGTCGGCTACGCGGACAAGACCGC
GAAATTCTCCGATCCCACCGGTATTCCGCCCGACTACGATCCGACCGGCCGCCCGTGGTACAAGCAGGCCGCGCAGGCGG
GCAAGCCGGTCGTCACGCCGCCCTATGTCGACGTCGGCACGGGCAAGCTCGTCGTCGCGTTCGCCGCGCCGATCATGCGC
GACGGCGCGCTGAAGGGCGTCGTGTCCGGCGACGTCGCGATGGACAGCGTGATCGCGAACGTCAAGGCGATCCACCCGAC
GCCCGGCAGTTTCGGGATGCTCGTCGACCGCAGCGGCCATATCGTCGCGCATGCCGATTCGAAGCTCACGCTCAAGCCCG
TCACCGATCTCTCCGACGATCTGAGCCTCGACGCGCTCGCCGCGGCGTCGGCCGACGAGAACGCCGCGCCGATCGACGCG
CACGTCGCGGGCGCGGCGAAGCTGATGCGCGCGCGCGCCGTGCCGGGCACCGACTGGCTGACCGTCGTCGCGCTCGACAA
GTCCGATGCGACGGCCGGCATGCATTCGCTGCTGCTCGTCTCGATCGGCACGCTCGTCGCGCTTGCCGCCGTCGCCGCGC
TGATCGTCGGCGCGATCACGGGCGTCGCGTTCCGCGGGCTCGCGCGCATTCGCGACGCGATGGAATCGATCGGCTCCGGC
ACGGGCGATCTGACGCAGCGCCTGCCCGATAGCGGCCGCGACGAAGTGGCGCAGATCGCGCGCTCGTTCAACGCGTTCGT
CAGCAAGCTGCAGGAGGTGATGCGCGTGATCCGCGACGCGAGCGAATCGGTGCGGCATGCGGCGGGCGAGATCGCGTCGG
GCAATCACGATCTGTCGCGCCGCACGGAATCGGCGGCGGCGAGCCTGCAGCAGACGGCCGCGTCGATCGAGGAGATCACG
TCGACGGTCACGCAATCGGCAGGCGCCGCGCGCCAGGCGAACGACATCGCGACGAACGCGGCGAGCGTCGCGTCGCGCGG
CGGCACGGTCGTGTCCGACGTCGTGTCGACGATGCACGAGATCGAAGGCGCGTCCGGCAAGATCGCCGACATCATCGGCG
TGATCGACGGCATCGCGTTCCAGACCAATATCCTCGCGCTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGGAGGGG
CGCGGCTTCGCGGTGGTCGCGGGCGAGGTGCGCTCGCTCGCGCAGCGCAGCGCGCAGGCGGCGAAGGAAATCAAGGCGCT
GATCGATTCGAGCGTGACGAGCGTGTCGACGGGCGCCACGCTCGTCCAGCAGGCCGGGCAGACGATGAGCGACATCGTCG
GCACGGTTTCGAACGTGACGACGATCATGCGCGAGATCTCGAATGCCGCCGACGAACAGACGCGCGGCATCCAGGAAGTG
AATCGCGCGGTCGCGCAGCTCGACGAGATGGTTCAGCAGAACGCGGCGCTCGTCGAGCAGTCGGCCGCGGCCGCCTCGGC
GTTGCAGACTCAGGCGGTCGAGCTCGCCGATGCGGTCGGGCAGTTCAAGGTCGCGTGA

Upstream 100 bases:

>100_bases
CATCGCGTAAACCCTAGAGCGAAAACACCAGACGTACAGCGTCCCGCGGGTCAAGTCGCGCGTTTGCGCAGCCGTAAACC
AATAGGTTCGCTCCACATCC

Downstream 100 bases:

>100_bases
TCGGCGCGCCGATCGCATATCGGTCACGCCTCGACCGTCGATCGCGCATCGGTCACGCGCGGGCCGCGCCGCGCCCGAGC
CAATCGCTCAGCGCCTGCGT

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MSPFMLSSIRSRILVACLAIVIGSLVINTALNYFVANRYNRESISQNLSAVLTGHEAGIADWVASKTQMIVSVEDAAISP
DPIPALKQIAAAGGFTNVYVGYADKTAKFSDPTGIPPDYDPTGRPWYKQAAQAGKPVVTPPYVDVGTGKLVVAFAAPIMR
DGALKGVVSGDVAMDSVIANVKAIHPTPGSFGMLVDRSGHIVAHADSKLTLKPVTDLSDDLSLDALAAASADENAAPIDA
HVAGAAKLMRARAVPGTDWLTVVALDKSDATAGMHSLLLVSIGTLVALAAVAALIVGAITGVAFRGLARIRDAMESIGSG
TGDLTQRLPDSGRDEVAQIARSFNAFVSKLQEVMRVIRDASESVRHAAGEIASGNHDLSRRTESAAASLQQTAASIEEIT
STVTQSAGAARQANDIATNAASVASRGGTVVSDVVSTMHEIEGASGKIADIIGVIDGIAFQTNILALNAAVEAARAGEEG
RGFAVVAGEVRSLAQRSAQAAKEIKALIDSSVTSVSTGATLVQQAGQTMSDIVGTVSNVTTIMREISNAADEQTRGIQEV
NRAVAQLDEMVQQNAALVEQSAAAASALQTQAVELADAVGQFKVA

Sequences:

>Translated_605_residues
MSPFMLSSIRSRILVACLAIVIGSLVINTALNYFVANRYNRESISQNLSAVLTGHEAGIADWVASKTQMIVSVEDAAISP
DPIPALKQIAAAGGFTNVYVGYADKTAKFSDPTGIPPDYDPTGRPWYKQAAQAGKPVVTPPYVDVGTGKLVVAFAAPIMR
DGALKGVVSGDVAMDSVIANVKAIHPTPGSFGMLVDRSGHIVAHADSKLTLKPVTDLSDDLSLDALAAASADENAAPIDA
HVAGAAKLMRARAVPGTDWLTVVALDKSDATAGMHSLLLVSIGTLVALAAVAALIVGAITGVAFRGLARIRDAMESIGSG
TGDLTQRLPDSGRDEVAQIARSFNAFVSKLQEVMRVIRDASESVRHAAGEIASGNHDLSRRTESAAASLQQTAASIEEIT
STVTQSAGAARQANDIATNAASVASRGGTVVSDVVSTMHEIEGASGKIADIIGVIDGIAFQTNILALNAAVEAARAGEEG
RGFAVVAGEVRSLAQRSAQAAKEIKALIDSSVTSVSTGATLVQQAGQTMSDIVGTVSNVTTIMREISNAADEQTRGIQEV
NRAVAQLDEMVQQNAALVEQSAAAASALQTQAVELADAVGQFKVA
>Mature_604_residues
SPFMLSSIRSRILVACLAIVIGSLVINTALNYFVANRYNRESISQNLSAVLTGHEAGIADWVASKTQMIVSVEDAAISPD
PIPALKQIAAAGGFTNVYVGYADKTAKFSDPTGIPPDYDPTGRPWYKQAAQAGKPVVTPPYVDVGTGKLVVAFAAPIMRD
GALKGVVSGDVAMDSVIANVKAIHPTPGSFGMLVDRSGHIVAHADSKLTLKPVTDLSDDLSLDALAAASADENAAPIDAH
VAGAAKLMRARAVPGTDWLTVVALDKSDATAGMHSLLLVSIGTLVALAAVAALIVGAITGVAFRGLARIRDAMESIGSGT
GDLTQRLPDSGRDEVAQIARSFNAFVSKLQEVMRVIRDASESVRHAAGEIASGNHDLSRRTESAAASLQQTAASIEEITS
TVTQSAGAARQANDIATNAASVASRGGTVVSDVVSTMHEIEGASGKIADIIGVIDGIAFQTNILALNAAVEAARAGEEGR
GFAVVAGEVRSLAQRSAQAAKEIKALIDSSVTSVSTGATLVQQAGQTMSDIVGTVSNVTTIMREISNAADEQTRGIQEVN
RAVAQLDEMVQQNAALVEQSAAAASALQTQAVELADAVGQFKVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=337, Percent_Identity=51.6320474777448, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=57.0422535211268, Blast_Score=278, Evalue=9e-76,
Organism=Escherichia coli, GI1788194, Length=298, Percent_Identity=53.0201342281879, Blast_Score=268, Evalue=6e-73,
Organism=Escherichia coli, GI1787690, Length=327, Percent_Identity=48.3180428134557, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=37.6543209876543, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62281; Mature: 62150

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFMLSSIRSRILVACLAIVIGSLVINTALNYFVANRYNRESISQNLSAVLTGHEAGIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH
DWVASKTQMIVSVEDAAISPDPIPALKQIAAAGGFTNVYVGYADKTAKFSDPTGIPPDYD
HHHHCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
PTGRPWYKQAAQAGKPVVTPPYVDVGTGKLVVAFAAPIMRDGALKGVVSGDVAMDSVIAN
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
VKAIHPTPGSFGMLVDRSGHIVAHADSKLTLKPVTDLSDDLSLDALAAASADENAAPIDA
HHEECCCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHH
HVAGAAKLMRARAVPGTDWLTVVALDKSDATAGMHSLLLVSIGTLVALAAVAALIVGAIT
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAFRGLARIRDAMESIGSGTGDLTQRLPDSGRDEVAQIARSFNAFVSKLQEVMRVIRDA
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SESVRHAAGEIASGNHDLSRRTESAAASLQQTAASIEEITSTVTQSAGAARQANDIATNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASVASRGGTVVSDVVSTMHEIEGASGKIADIIGVIDGIAFQTNILALNAAVEAARAGEEG
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGFAVVAGEVRSLAQRSAQAAKEIKALIDSSVTSVSTGATLVQQAGQTMSDIVGTVSNVT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TIMREISNAADEQTRGIQEVNRAVAQLDEMVQQNAALVEQSAAAASALQTQAVELADAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFKVA
CCCCC
>Mature Secondary Structure 
SPFMLSSIRSRILVACLAIVIGSLVINTALNYFVANRYNRESISQNLSAVLTGHEAGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHH
DWVASKTQMIVSVEDAAISPDPIPALKQIAAAGGFTNVYVGYADKTAKFSDPTGIPPDYD
HHHHCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
PTGRPWYKQAAQAGKPVVTPPYVDVGTGKLVVAFAAPIMRDGALKGVVSGDVAMDSVIAN
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
VKAIHPTPGSFGMLVDRSGHIVAHADSKLTLKPVTDLSDDLSLDALAAASADENAAPIDA
HHEECCCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHH
HVAGAAKLMRARAVPGTDWLTVVALDKSDATAGMHSLLLVSIGTLVALAAVAALIVGAIT
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAFRGLARIRDAMESIGSGTGDLTQRLPDSGRDEVAQIARSFNAFVSKLQEVMRVIRDA
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SESVRHAAGEIASGNHDLSRRTESAAASLQQTAASIEEITSTVTQSAGAARQANDIATNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASVASRGGTVVSDVVSTMHEIEGASGKIADIIGVIDGIAFQTNILALNAAVEAARAGEEG
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGFAVVAGEVRSLAQRSAQAAKEIKALIDSSVTSVSTGATLVQQAGQTMSDIVGTVSNVT
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TIMREISNAADEQTRGIQEVNRAVAQLDEMVQQNAALVEQSAAAASALQTQAVELADAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFKVA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]