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The map label for this gene is gmhA [H]

Identifier: 53720883

GI number: 53720883

Start: 3889496

End: 3890074

Strand: Reverse

Name: gmhA [H]

Synonym: BPSL3273

Alternate gene names: 53720883

Gene position: 3890074-3889496 (Counterclockwise)

Preceding gene: 53720884

Following gene: 53720882

Centisome position: 95.47

GC content: 69.26

Gene sequence:

>579_bases
ATGTCAGTCGAACGTATTCAGCAACATATCCGCGACAGCGCCGCGCTCGTTCACGAAGCGCTCGAGGCGCTGTCCCTGCC
GATCGCGGCGGCCGTGGACGCGATGTTCATGGCGCTCGCGAACGGCAACAAGATCGTCGCATGCGGCGACGGCCCATCGG
CCGCGGCGGCCGAGCGGCTTGCCGCCGCGTTGATCGGCGGCTTCGAGCGCGAGCGTCCCGGCCTGCCCGGGCTCGCGCTC
GATACCGATGCGAGCCGCTCCGGCACGGGCGCCGACGGCGATCAGATCTTCGCGCAACAGGTGCGCACGCTTGGCCAGAC
GGGCGATGTGCTGCTCGTGCTCGATCCGCTCGGCGAATCGCCGCGCGTGCTGGCCGCCGTCGAGGAGGCGCGCGAGCGCG
AGATGATCGTCATCGCGCTGACGGGCAACGGCGGCGGGTGTCTCGGCGCATCGCTCGCCGACACCGATATTCAGATCTGC
GTGCCGTCCGAGCGGGCGGTGCGCATCCAGGAAGTCCATCTGCTGACCATCCACTGCCTGTGCGACGGCATCGACGCGAT
GCTGCTGGGCGAGGATTGA

Upstream 100 bases:

>100_bases
TGCGGCGACGCTCGGGCGGCGGGGGCGGAGTGCGGTAAACTCGCCGCACTCACGATGCCGCGCGACGCAGACCACGCGCG
CAGTACCCGATTAGGAATCG

Downstream 100 bases:

>100_bases
TTCGAAGGAGAGCCGTCGATGAGTAACAGCCGCGTCAGACAGACGCTAGTCAGAACCACGCTCGTGATCGGCCTGTCGGC
CGGCCTCGCCGCCACGCTGC

Product: putative phosphosugar isomerase

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSVERIQQHIRDSAALVHEALEALSLPIAAAVDAMFMALANGNKIVACGDGPSAAAAERLAAALIGGFERERPGLPGLAL
DTDASRSGTGADGDQIFAQQVRTLGQTGDVLLVLDPLGESPRVLAAVEEAREREMIVIALTGNGGGCLGASLADTDIQIC
VPSERAVRIQEVHLLTIHCLCDGIDAMLLGED

Sequences:

>Translated_192_residues
MSVERIQQHIRDSAALVHEALEALSLPIAAAVDAMFMALANGNKIVACGDGPSAAAAERLAAALIGGFERERPGLPGLAL
DTDASRSGTGADGDQIFAQQVRTLGQTGDVLLVLDPLGESPRVLAAVEEAREREMIVIALTGNGGGCLGASLADTDIQIC
VPSERAVRIQEVHLLTIHCLCDGIDAMLLGED
>Mature_191_residues
SVERIQQHIRDSAALVHEALEALSLPIAAAVDAMFMALANGNKIVACGDGPSAAAAERLAAALIGGFERERPGLPGLALD
TDASRSGTGADGDQIFAQQVRTLGQTGDVLLVLDPLGESPRVLAAVEEAREREMIVIALTGNGGGCLGASLADTDIQICV
PSERAVRIQEVHLLTIHCLCDGIDAMLLGED

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789539, Length=189, Percent_Identity=44.973544973545, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1786416, Length=151, Percent_Identity=37.7483443708609, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 19889; Mature: 19758

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVERIQQHIRDSAALVHEALEALSLPIAAAVDAMFMALANGNKIVACGDGPSAAAAERL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
AAALIGGFERERPGLPGLALDTDASRSGTGADGDQIFAQQVRTLGQTGDVLLVLDPLGES
HHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC
PRVLAAVEEAREREMIVIALTGNGGGCLGASLADTDIQICVPSERAVRIQEVHLLTIHCL
CHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEEEECCCCCEEEHHHHEEEEEEH
CDGIDAMLLGED
HCCCCEEEECCC
>Mature Secondary Structure 
SVERIQQHIRDSAALVHEALEALSLPIAAAVDAMFMALANGNKIVACGDGPSAAAAERL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
AAALIGGFERERPGLPGLALDTDASRSGTGADGDQIFAQQVRTLGQTGDVLLVLDPLGES
HHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC
PRVLAAVEEAREREMIVIALTGNGGGCLGASLADTDIQICVPSERAVRIQEVHLLTIHCL
CHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCEEEEECCCCCEEEHHHHEEEEEEH
CDGIDAMLLGED
HCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA