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The map label for this gene is trbL [H]

Identifier: 53720872

GI number: 53720872

Start: 3877520

End: 3878950

Strand: Reverse

Name: trbL [H]

Synonym: BPSL3262

Alternate gene names: 53720872

Gene position: 3878950-3877520 (Counterclockwise)

Preceding gene: 53720873

Following gene: 53720871

Centisome position: 95.2

GC content: 58.98

Gene sequence:

>1431_bases
ATGTTTTTCAAAAGAGGCAATCTTTTTGCGCTCGGTTCGATGATGCTCCTCCACGTTGCGACTGCTTTTGCCGCACCGAT
GGACGTCAACGTCGTTGATTCGGTGATGGGCAAGTACCAATCTGCGGCCAGTTCGTGGGGCGGCGTCATGGTGAGCTACG
GGTCGTGGCTCTTCTGGGGATTGGCGCTCGTCAGCATGGTGTGGACGTACGGAATGATGGCGATGCGCCGCTCGGACATT
CAAGAGCTCTTTGCTGAATCGATTCGATTTTTCGGCACCCTGGGCTTCTTCTGGTGGATTCTGTACAACGGCCCGGCAAT
CGGAGATGCCGTCGTCAAATCGATGTGGATGATCGGAGCAAAGGCCATCGGCCAAGCAACAGACTTTACGCCTGGCGGCA
TCGTACAGATCGGCTATGACATTTTTGCCAAGGCGCTCGACCAGTCTTCTGTCTGGTCACCCACCGACAGTGTTGTTGGG
CTTCTCATGGCGCTGGCCGTGATGCTTGTCCTGACGATCGTCGGCGTGAACCTGCTTCTGGTCTTCGTATCGGCCTGGAT
CGTGATCTACGGTGGCGTGTTCTTCCTCGGCTTCGGGGGATCACGCTGGACCTCGGATATCGCTATCAGCTTTTACAAGC
ACGTCTTGGCGATAGGTGCGGAGCTGATGGTAATGCTCCTGCTCATTGGCATCGGCAAGACGTTCATCAACGAGTACTAC
TCCAGCATGGCCGCTGGCATTGACCTCAAGGAAATGGCGGTCATGCTCATCGCTGCCTTCGCGCTGATGTATCTCACAAA
CAAGATACCGCCGAGAATCGCAGGCATCGTTGGCGTCGGCGGTGTTGGCTCGATCGGTGGTGTTGGCGTTGGTTCGTTAA
TGGCTGCAGCTTCTATGACGGCTGGCGCTGCAGCGTCGGCCGGTTCGGCAGTAATGGCGGGCGCCACGAGCGCCGCCGGC
GGTGCATCTGCGCTTAAGGCGGCATTTCAGAGCGCGCAGCAACATGCAGCTCAGGGGGCGGGCAATTTCAGTGGTAGTGG
CGGTAGCGGTTCCGGTGCCATAGGTGGCAGCAGCGGCGGCGCCAGCAGCTCGTCGGGCGGTAGCGGCAGCTTCGGTTCGT
TCATGAGCAATGCTGGCCGCGTTGCAGCCGACATGGGCAGCAGCCTCGCGAACGGCGCTAGCCAGGTCGCCAAAGAAAAG
GCTGCGTCGATGATGGACTCTGCGAAAGAGCGCATCGGCCAAACCACGGGCGGCAGGATTGCGTCGGCAATCCGTGGAGG
CTCGCATTACCGGGACGCAGCCGGTGCGGATACGGTGAGCTTTGCTGGCGACAGTCTCGGCGCCGGCAACGTTCGTCGCC
AGCAGAACCCGATGAATGACGAAGTAGCGGCGTTCGTGAACCAGGATCGTTCTTCACGAGAAGAAACCTAA

Upstream 100 bases:

>100_bases
GGCAGCAATGTCGTCAGCTCTCCGCCCAAGAACTGGACGTGGGGCGATGCACCGTCTCAACAGGCGAAGAAAAATCAGTG
AGGGCCACGCTATGAGATCC

Downstream 100 bases:

>100_bases
AAAGCGCACCGGCCGGCGGCAACCGGCCGGCACTTCCACAACAACACCTGCTTGAGAGGTGAAGTATGGCAACCATGCAC
GATACCGAAGCTCGGGAAGT

Product: putative plasmid conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MFFKRGNLFALGSMMLLHVATAFAAPMDVNVVDSVMGKYQSAASSWGGVMVSYGSWLFWGLALVSMVWTYGMMAMRRSDI
QELFAESIRFFGTLGFFWWILYNGPAIGDAVVKSMWMIGAKAIGQATDFTPGGIVQIGYDIFAKALDQSSVWSPTDSVVG
LLMALAVMLVLTIVGVNLLLVFVSAWIVIYGGVFFLGFGGSRWTSDIAISFYKHVLAIGAELMVMLLLIGIGKTFINEYY
SSMAAGIDLKEMAVMLIAAFALMYLTNKIPPRIAGIVGVGGVGSIGGVGVGSLMAAASMTAGAAASAGSAVMAGATSAAG
GASALKAAFQSAQQHAAQGAGNFSGSGGSGSGAIGGSSGGASSSSGGSGSFGSFMSNAGRVAADMGSSLANGASQVAKEK
AASMMDSAKERIGQTTGGRIASAIRGGSHYRDAAGADTVSFAGDSLGAGNVRRQQNPMNDEVAAFVNQDRSSREET

Sequences:

>Translated_476_residues
MFFKRGNLFALGSMMLLHVATAFAAPMDVNVVDSVMGKYQSAASSWGGVMVSYGSWLFWGLALVSMVWTYGMMAMRRSDI
QELFAESIRFFGTLGFFWWILYNGPAIGDAVVKSMWMIGAKAIGQATDFTPGGIVQIGYDIFAKALDQSSVWSPTDSVVG
LLMALAVMLVLTIVGVNLLLVFVSAWIVIYGGVFFLGFGGSRWTSDIAISFYKHVLAIGAELMVMLLLIGIGKTFINEYY
SSMAAGIDLKEMAVMLIAAFALMYLTNKIPPRIAGIVGVGGVGSIGGVGVGSLMAAASMTAGAAASAGSAVMAGATSAAG
GASALKAAFQSAQQHAAQGAGNFSGSGGSGSGAIGGSSGGASSSSGGSGSFGSFMSNAGRVAADMGSSLANGASQVAKEK
AASMMDSAKERIGQTTGGRIASAIRGGSHYRDAAGADTVSFAGDSLGAGNVRRQQNPMNDEVAAFVNQDRSSREET
>Mature_476_residues
MFFKRGNLFALGSMMLLHVATAFAAPMDVNVVDSVMGKYQSAASSWGGVMVSYGSWLFWGLALVSMVWTYGMMAMRRSDI
QELFAESIRFFGTLGFFWWILYNGPAIGDAVVKSMWMIGAKAIGQATDFTPGGIVQIGYDIFAKALDQSSVWSPTDSVVG
LLMALAVMLVLTIVGVNLLLVFVSAWIVIYGGVFFLGFGGSRWTSDIAISFYKHVLAIGAELMVMLLLIGIGKTFINEYY
SSMAAGIDLKEMAVMLIAAFALMYLTNKIPPRIAGIVGVGGVGSIGGVGVGSLMAAASMTAGAAASAGSAVMAGATSAAG
GASALKAAFQSAQQHAAQGAGNFSGSGGSGSGAIGGSSGGASSSSGGSGSFGSFMSNAGRVAADMGSSLANGASQVAKEK
AASMMDSAKERIGQTTGGRIASAIRGGSHYRDAAGADTVSFAGDSLGAGNVRRQQNPMNDEVAAFVNQDRSSREET

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 48764; Mature: 48764

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]