| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720871
Identifier: 53720871
GI number: 53720871
Start: 3877164
End: 3877454
Strand: Reverse
Name: 53720871
Synonym: BPSL3261
Alternate gene names: NA
Gene position: 3877454-3877164 (Counterclockwise)
Preceding gene: 53720872
Following gene: 53720870
Centisome position: 95.16
GC content: 55.67
Gene sequence:
>291_bases ATGGCAACCATGCACGATACCGAAGCTCGGGAAGTTATCCATCACACGGCAATGCAGCTCGCGGCCCTAGAATTCATAGA TCCGCACGCAGCTAAGGATCTATCTGAGATGACCGAAGCCATGGTGAACCTCTTTGTGGTCGTCTTCTATCAGGCCGAAA CTGGCCGGGCGACGCGCTCGGACTTTAGAGAGGCAATGACCGCGGTACGCCAAGCGTTGCTGCAGTATGCGGAACAGTTG AAGTGCCATGGCGGCATTTCTGGGAAGGGGGCTAACGAGGCATGGTCATGA
Upstream 100 bases:
>100_bases TGAACCAGGATCGTTCTTCACGAGAAGAAACCTAAAAAGCGCACCGGCCGGCGGCAACCGGCCGGCACTTCCACAACAAC ACCTGCTTGAGAGGTGAAGT
Downstream 100 bases:
>100_bases AAAATCATCCGCACCCCGGCGAATTGCCGCGCGAGGAAGTTTGTAGCCGGTTCGGCGTCGATGTAGCCGGCCTGGCCAAA CGGCTCAGGGTGTCGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MATMHDTEAREVIHHTAMQLAALEFIDPHAAKDLSEMTEAMVNLFVVVFYQAETGRATRSDFREAMTAVRQALLQYAEQL KCHGGISGKGANEAWS
Sequences:
>Translated_96_residues MATMHDTEAREVIHHTAMQLAALEFIDPHAAKDLSEMTEAMVNLFVVVFYQAETGRATRSDFREAMTAVRQALLQYAEQL KCHGGISGKGANEAWS >Mature_95_residues ATMHDTEAREVIHHTAMQLAALEFIDPHAAKDLSEMTEAMVNLFVVVFYQAETGRATRSDFREAMTAVRQALLQYAEQLK CHGGISGKGANEAWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10654; Mature: 10523
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMHDTEAREVIHHTAMQLAALEFIDPHAAKDLSEMTEAMVNLFVVVFYQAETGRATRS CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH DFREAMTAVRQALLQYAEQLKCHGGISGKGANEAWS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATMHDTEAREVIHHTAMQLAALEFIDPHAAKDLSEMTEAMVNLFVVVFYQAETGRATRS CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH DFREAMTAVRQALLQYAEQLKCHGGISGKGANEAWS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA