Click here to switch to the map view.

The map label for this gene is dgoK [H]

Identifier: 53720579

GI number: 53720579

Start: 3543743

End: 3544756

Strand: Reverse

Name: dgoK [H]

Synonym: BPSL2971

Alternate gene names: 53720579

Gene position: 3544756-3543743 (Counterclockwise)

Preceding gene: 53720580

Following gene: 53720578

Centisome position: 87.0

GC content: 74.65

Gene sequence:

>1014_bases
ATGACGGCGCAAGCGAGCACGCCCGCGCTCATCGGGCTCGACTGGGGCACGACGTCGCTGCGCGCGTACCTGTTCGCCGC
CGACGGCTCGGTGCTCGACACGCGCGCGCTCGCCGCGGGCGTGATGAGCCTGCCCGATGCGCCGGGTGCGTCGCCGCAGC
AGACGTTCGACGCCGCGTTCGAGCGCGCGTGCGGCGCGTGGCTCGACCGCGCGCCGCACGTGCCCGCGCTGGCGGCCGGC
ATGGTCGGCAGCGCGCAGGGCTGGCGCGAGGCGCCTTACGTGACGATGCCCGCCGCCGCCGACACGTTCGCGTCGAGCCT
CGTGCGGTTTCGCACCGCGCGCGGCTCCGCGCTCGCGATCGTGCCGGGCGCGCTCGAGCCGGGCGAGCTGCCGGACGTGA
TGCGCGGCGAGGAAACGCAGATTGTCGGTGCGCTCGCGGCGGAGCCCGCGCTCGCGGCCGAACGCGCGGGCGCGCTGATC
GGGCTGCCCGGCACGCATGCGAAATGGGCATGGGTGCGCGGCGGGCGTATCGAATGGTTTCGGACTTACATGACGGGCGA
GCTGTTCGCCACGCTGCGCGGGCACACGATCCTCGGCCGCACGATGCAGGCGAGCGATGCGCCCGACTGGTCCGCGTTCG
CGCGCGGCGTGCGGACCGCGCGGCGCAAGCGCGACGAAGGGCTGCTCGCGACGCTGTTCAGCACGCGCACCCTCGGCCTC
ACCGGGCAGCTCGCGCCGCACGCGCAGGGCGACTATTTGTCCGGACTGCTGATCGGTCACGAATTGAATGCGCTCGAGGC
GCTGCTCGGCGGCCAGCATGCGTCGCTCGCGGCGCTCGCGCCGCGCCTCGTCGGCGAAGGCGCGCTGTGCGACCGTTACC
GCCGCGCGCTCGCCGAATTCGGTTGCGGCGATGCGCGTATCGTCGAGCGCGCGTCGGAGCGCGGCCTGTGGCGCATCGCG
GTGCAGGCGGGGCTCGTCGGCGCAGCGTGCGACGCGCCGCTCGCGCCGCAATAG

Upstream 100 bases:

>100_bases
ACCGGATGAACGAGCTCGTGCCGCTCGTGCAGCGCGGCGCGCGCGCGATTTCGGCCGATCTCGGCTGGAGCGCGCCGCAG
GCGACGCGCAGGATCAAGCG

Downstream 100 bases:

>100_bases
GCCCGCGTCTCTACACGAAGTGGGTGGAGGAGAGGACATGTCGATGGATGCCGAAACACTGCGTTTTCCCGCGCCGTATG
CGCCGCATCGCGCGCTGATG

Product: putative galactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTAQASTPALIGLDWGTTSLRAYLFAADGSVLDTRALAAGVMSLPDAPGASPQQTFDAAFERACGAWLDRAPHVPALAAG
MVGSAQGWREAPYVTMPAAADTFASSLVRFRTARGSALAIVPGALEPGELPDVMRGEETQIVGALAAEPALAAERAGALI
GLPGTHAKWAWVRGGRIEWFRTYMTGELFATLRGHTILGRTMQASDAPDWSAFARGVRTARRKRDEGLLATLFSTRTLGL
TGQLAPHAQGDYLSGLLIGHELNALEALLGGQHASLAALAPRLVGEGALCDRYRRALAEFGCGDARIVERASERGLWRIA
VQAGLVGAACDAPLAPQ

Sequences:

>Translated_337_residues
MTAQASTPALIGLDWGTTSLRAYLFAADGSVLDTRALAAGVMSLPDAPGASPQQTFDAAFERACGAWLDRAPHVPALAAG
MVGSAQGWREAPYVTMPAAADTFASSLVRFRTARGSALAIVPGALEPGELPDVMRGEETQIVGALAAEPALAAERAGALI
GLPGTHAKWAWVRGGRIEWFRTYMTGELFATLRGHTILGRTMQASDAPDWSAFARGVRTARRKRDEGLLATLFSTRTLGL
TGQLAPHAQGDYLSGLLIGHELNALEALLGGQHASLAALAPRLVGEGALCDRYRRALAEFGCGDARIVERASERGLWRIA
VQAGLVGAACDAPLAPQ
>Mature_336_residues
TAQASTPALIGLDWGTTSLRAYLFAADGSVLDTRALAAGVMSLPDAPGASPQQTFDAAFERACGAWLDRAPHVPALAAGM
VGSAQGWREAPYVTMPAAADTFASSLVRFRTARGSALAIVPGALEPGELPDVMRGEETQIVGALAAEPALAAERAGALIG
LPGTHAKWAWVRGGRIEWFRTYMTGELFATLRGHTILGRTMQASDAPDWSAFARGVRTARRKRDEGLLATLFSTRTLGLT
GQLAPHAQGDYLSGLLIGHELNALEALLGGQHASLAALAPRLVGEGALCDRYRRALAEFGCGDARIVERASERGLWRIAV
QAGLVGAACDAPLAPQ

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=300, Percent_Identity=35, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 35291; Mature: 35159

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQASTPALIGLDWGTTSLRAYLFAADGSVLDTRALAAGVMSLPDAPGASPQQTFDAAF
CCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ERACGAWLDRAPHVPALAAGMVGSAQGWREAPYVTMPAAADTFASSLVRFRTARGSALAI
HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEE
VPGALEPGELPDVMRGEETQIVGALAAEPALAAERAGALIGLPGTHAKWAWVRGGRIEWF
ECCCCCCCCCCHHHCCCCHHEEEHHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCHHH
RTYMTGELFATLRGHTILGRTMQASDAPDWSAFARGVRTARRKRDEGLLATLFSTRTLGL
HHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCC
TGQLAPHAQGDYLSGLLIGHELNALEALLGGQHASLAALAPRLVGEGALCDRYRRALAEF
CCCCCCCCCCCHHHHEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
GCGDARIVERASERGLWRIAVQAGLVGAACDAPLAPQ
CCCHHHHHHHHHHCCEEEEEEHHCCEECCCCCCCCCC
>Mature Secondary Structure 
TAQASTPALIGLDWGTTSLRAYLFAADGSVLDTRALAAGVMSLPDAPGASPQQTFDAAF
CCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ERACGAWLDRAPHVPALAAGMVGSAQGWREAPYVTMPAAADTFASSLVRFRTARGSALAI
HHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEE
VPGALEPGELPDVMRGEETQIVGALAAEPALAAERAGALIGLPGTHAKWAWVRGGRIEWF
ECCCCCCCCCCHHHCCCCHHEEEHHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCHHH
RTYMTGELFATLRGHTILGRTMQASDAPDWSAFARGVRTARRKRDEGLLATLFSTRTLGL
HHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCC
TGQLAPHAQGDYLSGLLIGHELNALEALLGGQHASLAALAPRLVGEGALCDRYRRALAEF
CCCCCCCCCCCHHHHEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
GCGDARIVERASERGLWRIAVQAGLVGAACDAPLAPQ
CCCHHHHHHHHHHCCEEEEEEHHCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]