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The map label for this gene is ytfH [C]

Identifier: 53720470

GI number: 53720470

Start: 3423627

End: 3424163

Strand: Reverse

Name: ytfH [C]

Synonym: BPSL2862

Alternate gene names: 53720470

Gene position: 3424163-3423627 (Counterclockwise)

Preceding gene: 53720471

Following gene: 53720469

Centisome position: 84.04

GC content: 72.07

Gene sequence:

>537_bases
ATGCAACCCATCGTCCATAGTGCGTGCGAGCCGGCGCCGCGCGCCGAGACTCCTCCGTTTTTTCCGAAGCCCATGGCCCG
ACGTAGAGACATGAGCGACGACGCCTGCCCCGTCGCGCGCGCGGTGGATGCGGTCGGCGATCGCTGGTCGCTCCTCATCG
TGCGCGACGCGTTCGACGGCGTGCGCCGCTTCTCCGAGTTCCAGCGCAATCTCGGCATCGCGCGCAACATGCTCGCCGAC
CGGTTGAAGACGCTCGTCGAAGCGGGCGTGCTCGCCGCGGCACCCGCGTCCGACGGCTCCGCGCATCACGAGTACGTGCT
GACCGACAAGGGGCGTGCGCTCTTTCCGGTCGTCGTCGCGCTGCGGCAGTGGGGCGAGTCGCAACTGTTCGGCGCGGGCG
AGCCGCATTCGCGCCTCGTCGAGCGCCGCAGCGGCCTGCCCGTCGCGCCGATGAGCCCGCGCACGCAGAGCGGCCGCGCG
CTGCGGCCCGAGGACGCGGTCGTCGACAAGCGCGGCGCGGACGACGCGGCGACGTGA

Upstream 100 bases:

>100_bases
GCGCGATCGCTCGACGCGCCCGGCGTGCTCGGTGCGCTTGGGATGCTCGGCGCGACCGGCGCGACCGGTGCGATTGGCGC
GGCGCGCCGGCGGTTTTAGA

Downstream 100 bases:

>100_bases
ACCGATACGGCGTGCCGGCGCTCGCGCGCGCCGCGCAGCGGGTGAAGCGGCGAGCCTGATGACCCCGGTGAAACGGATGA
GTCGACGGACCCGACGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MQPIVHSACEPAPRAETPPFFPKPMARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLAD
RLKTLVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRA
LRPEDAVVDKRGADDAAT

Sequences:

>Translated_178_residues
MQPIVHSACEPAPRAETPPFFPKPMARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLAD
RLKTLVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRA
LRPEDAVVDKRGADDAAT
>Mature_178_residues
MQPIVHSACEPAPRAETPPFFPKPMARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDGVRRFSEFQRNLGIARNMLAD
RLKTLVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVALRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRA
LRPEDAVVDKRGADDAAT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 19392; Mature: 19392

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIVHSACEPAPRAETPPFFPKPMARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDG
CCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHH
VRRFSEFQRNLGIARNMLADRLKTLVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHH
LRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRALRPEDAVVDKRGADDAAT
HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQPIVHSACEPAPRAETPPFFPKPMARRRDMSDDACPVARAVDAVGDRWSLLIVRDAFDG
CCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHH
VRRFSEFQRNLGIARNMLADRLKTLVEAGVLAAAPASDGSAHHEYVLTDKGRALFPVVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHH
LRQWGESQLFGAGEPHSRLVERRSGLPVAPMSPRTQSGRALRPEDAVVDKRGADDAAT
HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]