Click here to switch to the map view.

The map label for this gene is 53720449

Identifier: 53720449

GI number: 53720449

Start: 3402117

End: 3402689

Strand: Reverse

Name: 53720449

Synonym: BPSL2841

Alternate gene names: NA

Gene position: 3402689-3402117 (Counterclockwise)

Preceding gene: 53720456

Following gene: 53720448

Centisome position: 83.51

GC content: 73.65

Gene sequence:

>573_bases
ATGGGCAATCGCTTGAGCAAGATCGCGACCCGCACGGGCGACGACGGCACGACGGGCCTCGGCGACGGCAGCCGCGTGCG
CAAGGACGACGCGCGGATCGCGGCGATCGGCGACGTCGACGAATTGAACTCGCAGCTCGGCGTGCTGCTCGCCGAGCCGC
TGCCGGACGATGTTCGCGCGGCGCTTTCGTCGATCCAGCACGACCTGTTCGACCTGGGCGGCGAGCTGTGCATTCCGGGG
CACGCGGCGATCACCGACGCGCATCTCGCGCGCCTGGACGACTGGCTCGCGCACTACAACGCGCAGCTGCCGCCGCTCGA
GGAGTTCATCCTGCCGGGCGGCGCGCGCGGCGCGGCGCTCGCGCACGTATGCCGGACCGTCTGCCGGCGCGCGGAGCGCG
CGATCGTCGCGCTCGGCGTGCACGCGCCGCTCGACGCGGCGCCGCGCCGCTACGTGAACCGGCTGTCGGATCTGCTGTTC
GTGCTCGCGCGGGTGCTGAACCGCGCGGCGGGCGGCGCCGACGTGCTGTGGGACCGCACGCGCGCGCACGGAACCCCGCA
CGGAACCCGTTGA

Upstream 100 bases:

>100_bases
ACGCTCGAATGGATGCGCGCCGCCCCGAACGCGGCTGCGATAATAGGGATTTCACCGACGCGGCGCGCCCCGCCGCCGAC
GGCCAACGACGGGAGACATG

Downstream 100 bases:

>100_bases
TGCGCATCATTGCAATCGCGGGCCCGTTATGGCGAGGTGCGACAATTTGACCGCCGGAGGTGCGCTCATAAAGATGTATC
GTTTGCGAATGTTTAACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGNRLSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQLGVLLAEPLPDDVRAALSSIQHDLFDLGGELCIPG
HAAITDAHLARLDDWLAHYNAQLPPLEEFILPGGARGAALAHVCRTVCRRAERAIVALGVHAPLDAAPRRYVNRLSDLLF
VLARVLNRAAGGADVLWDRTRAHGTPHGTR

Sequences:

>Translated_190_residues
MGNRLSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQLGVLLAEPLPDDVRAALSSIQHDLFDLGGELCIPG
HAAITDAHLARLDDWLAHYNAQLPPLEEFILPGGARGAALAHVCRTVCRRAERAIVALGVHAPLDAAPRRYVNRLSDLLF
VLARVLNRAAGGADVLWDRTRAHGTPHGTR
>Mature_189_residues
GNRLSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQLGVLLAEPLPDDVRAALSSIQHDLFDLGGELCIPGH
AAITDAHLARLDDWLAHYNAQLPPLEEFILPGGARGAALAHVCRTVCRRAERAIVALGVHAPLDAAPRRYVNRLSDLLFV
LARVLNRAAGGADVLWDRTRAHGTPHGTR

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=187, Percent_Identity=38.5026737967914, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115534154, Length=196, Percent_Identity=33.6734693877551, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20295; Mature: 20164

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRLSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQLGVLLAEPLPDDVRA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCHHHHH
ALSSIQHDLFDLGGELCIPGHAAITDAHLARLDDWLAHYNAQLPPLEEFILPGGARGAAL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHH
AHVCRTVCRRAERAIVALGVHAPLDAAPRRYVNRLSDLLFVLARVLNRAAGGADVLWDRT
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RAHGTPHGTR
HCCCCCCCCC
>Mature Secondary Structure 
GNRLSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQLGVLLAEPLPDDVRA
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCHHHHH
ALSSIQHDLFDLGGELCIPGHAAITDAHLARLDDWLAHYNAQLPPLEEFILPGGARGAAL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHH
AHVCRTVCRRAERAIVALGVHAPLDAAPRRYVNRLSDLLFVLARVLNRAAGGADVLWDRT
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RAHGTPHGTR
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]