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The map label for this gene is dedA [H]

Identifier: 53720422

GI number: 53720422

Start: 3364033

End: 3364776

Strand: Reverse

Name: dedA [H]

Synonym: BPSL2813

Alternate gene names: 53720422

Gene position: 3364776-3364033 (Counterclockwise)

Preceding gene: 53720425

Following gene: 53720416

Centisome position: 82.58

GC content: 63.17

Gene sequence:

>744_bases
TTGGCTTCCGGCCCTTTGAGGCCGGCGCGCGCTCATCTCGTCACCGATACCAAGGAAACGCATTTGGAAACGCTGCTTCA
TTTCGTCAGCCTCGTCGTGCACATCGATGCATTTCTCGGCGATTTCATCCGGCAGTACGGCGCCTGGGTCTATCTGGTGC
TGTTCCTGATCGTTTTCTGCGAAACGGGGCTCGTGATCTTCCCGTTCCTGCCGGGCGATTCGCTGCTCTTCATCGCGGGC
GCGTTCGCGGCGACGGGCGAAATGACGCTTGCGGGCCTCCTCGTGCTGCTGCTCGTCGCGGCGGTGGGCGGCAATACGGT
CAACTATCTGATCGGCCGCGCGATCGGGCCGAAGGTCTTCAATACGCACATTCCGGGGCTCGAACGCTTCCTCGACCGCG
CCGCGCTGCAGAAGACCCACAATTTCTACGAGCGGCACGGCGGCAAGACGCTCGTGCTCGCGCGCTTCATCCCGGTCGTG
CGCACGTTCGCGCCGTTCGTCGCGGGCGCCTCGGCGATGAGCGTCGCGCGCTTTCAGTTGTTCAACGTGATCGGCGCGCT
GATCTGGGTGCTGCTCCTCGTCTTTCTCGGCTACTTCTTCGGCAACATCCCGTTCATTCGTCATTACCTGAACGTGATCG
TGCTCGTCGGGATCGGCGCGGCAGTGATCCCCGTCGCGCTCGGCGCGCTATGGAAGCTGCTGCGCCGCAAGTCGGACGCG
CGAAAGACGCAGGCGAATCGCTGA

Upstream 100 bases:

>100_bases
GCGTGGCGCGGCGCGTGCCGCGTTCGGTGCGCGACGTCGCTCGTCGGCCGAATTTCACGGTCGCTTAAGGCACTTTCGGT
ATCATGACAGCGTTGCTTTT

Downstream 100 bases:

>100_bases
GCGGCGCGCACGGAGCGCCGCCCGTGGGGCGAACCTCGGGCGGCCGTGCGGCGCGCGAGGTCCGGCGCGAAGGATTGCAT
GGCGTGGCGGCGAGCCACGC

Product: DedA family transmembrane protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MASGPLRPARAHLVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDSLLFIAG
AFAATGEMTLAGLLVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALQKTHNFYERHGGKTLVLARFIPVV
RTFAPFVAGASAMSVARFQLFNVIGALIWVLLLVFLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVALGALWKLLRRKSDA
RKTQANR

Sequences:

>Translated_247_residues
MASGPLRPARAHLVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDSLLFIAG
AFAATGEMTLAGLLVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALQKTHNFYERHGGKTLVLARFIPVV
RTFAPFVAGASAMSVARFQLFNVIGALIWVLLLVFLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVALGALWKLLRRKSDA
RKTQANR
>Mature_246_residues
ASGPLRPARAHLVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVIFPFLPGDSLLFIAGA
FAATGEMTLAGLLVLLLVAAVGGNTVNYLIGRAIGPKVFNTHIPGLERFLDRAALQKTHNFYERHGGKTLVLARFIPVVR
TFAPFVAGASAMSVARFQLFNVIGALIWVLLLVFLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVALGALWKLLRRKSDAR
KTQANR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=205, Percent_Identity=49.7560975609756, Blast_Score=211, Evalue=5e-56,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=40.2439024390244, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789384, Length=166, Percent_Identity=36.7469879518072, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27113; Mature: 26981

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGPLRPARAHLVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFC
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETGLVIFPFLPGDSLLFIAGAFAATGEMTLAGLLVLLLVAAVGGNTVNYLIGRAIGPKVF
CCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
NTHIPGLERFLDRAALQKTHNFYERHGGKTLVLARFIPVVRTFAPFVAGASAMSVARFQL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FNVIGALIWVLLLVFLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVALGALWKLLRRKSDA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTQANR
HHCCCCC
>Mature Secondary Structure 
ASGPLRPARAHLVTDTKETHLETLLHFVSLVVHIDAFLGDFIRQYGAWVYLVLFLIVFC
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETGLVIFPFLPGDSLLFIAGAFAATGEMTLAGLLVLLLVAAVGGNTVNYLIGRAIGPKVF
CCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
NTHIPGLERFLDRAALQKTHNFYERHGGKTLVLARFIPVVRTFAPFVAGASAMSVARFQL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FNVIGALIWVLLLVFLGYFFGNIPFIRHYLNVIVLVGIGAAVIPVALGALWKLLRRKSDA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKTQANR
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]