| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is amsG [H]
Identifier: 53720390
GI number: 53720390
Start: 3319533
End: 3320654
Strand: Reverse
Name: amsG [H]
Synonym: BPSL2781
Alternate gene names: 53720390
Gene position: 3320654-3319533 (Counterclockwise)
Preceding gene: 53720391
Following gene: 53720389
Centisome position: 81.5
GC content: 66.22
Gene sequence:
>1122_bases ATGAACGTAGAAGTACGAATCAAATTATTGACGAATCGCAATCGAGGTTCACTTATGCCAGCGATATTTCCCAGGGTCGT CGACATTGCGGTGATCGTGTTCGGCGCGTTCCTTCCGATTCTGATCGAGGCGTCGGGCGGCCCGCACGCCGAGATCTTCG ACGGCACGCTGGTGGCGTTCGCCGCCGCGCTATCGTTGTCGGTCTTTCCCGCGTGCGGGATCTATGAGGCGTCCCGGCGG CGCTCGCCCGTGCATCTGATCAGCCGCACGGCGCTCGCGTGGCTCGTCGTGCAGGGCGGCACCGTCGTGCTGCTGTACGT GCTGCATCGCGCGCAGATCCTGTCGAGCGCCTGGTTCGCCTACTGGACCGTGACGACGGGCATTGGCCTCCTGATCTTTC GCGCGGTGACGCTCGCGATCTTCGGTCTCCTCGCGCGCGCGAGCCGGCAGGTGAAGGCCGCGACGCTCGATCAGGTGGGG CACGTCGCGCAGCGCATGCGCACGTCGGGTATCGCCAAGCGCATCGTCAAGCGCGCGTTCGACGTTGCCGCCGCGTCGTG CCTGATCGTCGTGCTGTCGCCCGCGCTCGCCGTCATCGCGTTCCTCGTGAAGCGCGACGGCGGCCCCGCCGTGTTCGGGC ACGTGCGCATCGGGCGCGACGGCCGTCCGTTCAAGTGCCTGAAGTTCCGCTCGATGGTGATGAACGCCGACGCCGTGCTG AAGGCGCTGCTCGAGCGCGACCCGCACGCGCGCGCGGAATGGGAGCGCGAGTTCAAGTTGAAGAACGACGTGCGGATCAC GCCGATCGGCCGCTTCCTGCGCCGCAGCAGTCTCGACGAGCTGCCGCAGTTGATGAACGTCGTGAGGGGCGAGATGAGCC TGGTCGGGCCGCGTCCGGTCGTCGAGGCCGAGCTCGCGCGCTACGGCGACGACGTGCGCTATTACCTCGCCGCGAAGCCC GGCATGACGGGGCTTTGGCAAGTGAGCGGGCGCAACGATACCAGCTACGCGACACGGGTGTCGCTCGACGTGTCGTACGT GAAGGAATGGTCGCTTCGCCGCGACCTGGTCATCCTGTTGAAGACCGTCAACGTCGTCCTGCGCGGATCGGGTGCGTATT GA
Upstream 100 bases:
>100_bases GATCGTCGTTTCGGGAAGGCCGGCGAGCGCAAGCCGATTCGGAGTCCAATGCATCGATGAAGTGACGCAATGAATGCCGC ATGCGGGAAGCGCGTTCGGC
Downstream 100 bases:
>100_bases AGCCGTTCGTGCGGCGCTTGCGGCCGGAACCGGCCGGAACGAGAAAATCGATAGAGGTGTGGATGGGTAGTCTGGGGGAA GCAGGCGGCATCGCGCCGCC
Product: putative transmembrane sugar transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNVEVRIKLLTNRNRGSLMPAIFPRVVDIAVIVFGAFLPILIEASGGPHAEIFDGTLVAFAAALSLSVFPACGIYEASRR RSPVHLISRTALAWLVVQGGTVVLLYVLHRAQILSSAWFAYWTVTTGIGLLIFRAVTLAIFGLLARASRQVKAATLDQVG HVAQRMRTSGIAKRIVKRAFDVAAASCLIVVLSPALAVIAFLVKRDGGPAVFGHVRIGRDGRPFKCLKFRSMVMNADAVL KALLERDPHARAEWEREFKLKNDVRITPIGRFLRRSSLDELPQLMNVVRGEMSLVGPRPVVEAELARYGDDVRYYLAAKP GMTGLWQVSGRNDTSYATRVSLDVSYVKEWSLRRDLVILLKTVNVVLRGSGAY
Sequences:
>Translated_373_residues MNVEVRIKLLTNRNRGSLMPAIFPRVVDIAVIVFGAFLPILIEASGGPHAEIFDGTLVAFAAALSLSVFPACGIYEASRR RSPVHLISRTALAWLVVQGGTVVLLYVLHRAQILSSAWFAYWTVTTGIGLLIFRAVTLAIFGLLARASRQVKAATLDQVG HVAQRMRTSGIAKRIVKRAFDVAAASCLIVVLSPALAVIAFLVKRDGGPAVFGHVRIGRDGRPFKCLKFRSMVMNADAVL KALLERDPHARAEWEREFKLKNDVRITPIGRFLRRSSLDELPQLMNVVRGEMSLVGPRPVVEAELARYGDDVRYYLAAKP GMTGLWQVSGRNDTSYATRVSLDVSYVKEWSLRRDLVILLKTVNVVLRGSGAY >Mature_373_residues MNVEVRIKLLTNRNRGSLMPAIFPRVVDIAVIVFGAFLPILIEASGGPHAEIFDGTLVAFAAALSLSVFPACGIYEASRR RSPVHLISRTALAWLVVQGGTVVLLYVLHRAQILSSAWFAYWTVTTGIGLLIFRAVTLAIFGLLARASRQVKAATLDQVG HVAQRMRTSGIAKRIVKRAFDVAAASCLIVVLSPALAVIAFLVKRDGGPAVFGHVRIGRDGRPFKCLKFRSMVMNADAVL KALLERDPHARAEWEREFKLKNDVRITPIGRFLRRSSLDELPQLMNVVRGEMSLVGPRPVVEAELARYGDDVRYYLAAKP GMTGLWQVSGRNDTSYATRVSLDVSYVKEWSLRRDLVILLKTVNVVLRGSGAY
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=205, Percent_Identity=40, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 41091; Mature: 41091
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVEVRIKLLTNRNRGSLMPAIFPRVVDIAVIVFGAFLPILIEASGGPHAEIFDGTLVAF CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCHHHHHH AAALSLSVFPACGIYEASRRRSPVHLISRTALAWLVVQGGTVVLLYVLHRAQILSSAWFA HHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHH YWTVTTGIGLLIFRAVTLAIFGLLARASRQVKAATLDQVGHVAQRMRTSGIAKRIVKRAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVAAASCLIVVLSPALAVIAFLVKRDGGPAVFGHVRIGRDGRPFKCLKFRSMVMNADAVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHH KALLERDPHARAEWEREFKLKNDVRITPIGRFLRRSSLDELPQLMNVVRGEMSLVGPRPV HHHHHCCCCCCHHHHHHCCCCCCCEECHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCH VEAELARYGDDVRYYLAAKPGMTGLWQVSGRNDTSYATRVSLDVSYVKEWSLRRDLVILL HHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH KTVNVVLRGSGAY HHHHHHEECCCCC >Mature Secondary Structure MNVEVRIKLLTNRNRGSLMPAIFPRVVDIAVIVFGAFLPILIEASGGPHAEIFDGTLVAF CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHCHHHHHH AAALSLSVFPACGIYEASRRRSPVHLISRTALAWLVVQGGTVVLLYVLHRAQILSSAWFA HHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHH YWTVTTGIGLLIFRAVTLAIFGLLARASRQVKAATLDQVGHVAQRMRTSGIAKRIVKRAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVAAASCLIVVLSPALAVIAFLVKRDGGPAVFGHVRIGRDGRPFKCLKFRSMVMNADAVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHH KALLERDPHARAEWEREFKLKNDVRITPIGRFLRRSSLDELPQLMNVVRGEMSLVGPRPV HHHHHCCCCCCHHHHHHCCCCCCCEECHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCH VEAELARYGDDVRYYLAAKPGMTGLWQVSGRNDTSYATRVSLDVSYVKEWSLRRDLVILL HHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH KTVNVVLRGSGAY HHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]