| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wbiF [C]
Identifier: 53720285
GI number: 53720285
Start: 3200555
End: 3201385
Strand: Reverse
Name: wbiF [C]
Synonym: BPSL2675
Alternate gene names: 53720285
Gene position: 3201385-3200555 (Counterclockwise)
Preceding gene: 53720286
Following gene: 53720284
Centisome position: 78.57
GC content: 57.88
Gene sequence:
>831_bases GTGCCTCATTCCGAACCGAAATTTCTGACTGTGTCGATCGTCGTCTATAGGCCGGACGTGCGACAACTGACACGCACGCT TTCCAGTCTGCTCGTCGCGCTCGAGAAGCTCGACGGCAGCCGGCCGGGCGCGCGGACGGCCCTCTATCTTGTCGACAACG GTGGCGCGCCGGGATCGTTGCCTGCGTTTGACGAGATGCTTGCTCGCGGCATTGATTGCACCGTCATTAACGGCCACGGT AATGTGGGTTACGGACGCGGCCACAACCATGCCATCGAGCGAGTCGCGAGCCGCTACCACTTGATTTTGAACCCTGATGT CGACCTGGACGAGAATGCACTCGTGACCGCAATCGATTTTTTCGACGCTCATTCGGACGTCGGCCTCGTCGCACCGCGCG TCGACGACGAGCAGGGGCATACGCAATATTTGTGCAGACGTTACCCGACATTATTTGACCTCTTCGTGAGAGGATTCATG CCCGCTGGCATTCGGAACGCATTCTCTCGGCGCCTGGCACGCTACGAGATGCGAGATGTCGTCAATGCGACCGATGTCGT CTGGGATCCGGCAATCGTCAGCGGTTGTTTCATGCTGTTTCGAACGGACGTATTGAAAGCGCTGGGCGGATTCGATGCGC GTTACTTCTTGTATTTCGAGGATTATGACCTGAGTTTGCGCACGCACGACGTCGCGCGGGTTGCATATGTCCCCAGGGTC CTGATTCGCCACTATGGCGGTGGCGCGGCCCGTAAAGGGATGCGTCATGTTCGCCTGTTCGCGATATCGGCATACCACTT CTTCAACCGCTTCGGCTGGAAATGGCTATGA
Upstream 100 bases:
>100_bases ATCGTCGAATGTCGCCGCGCTCCTGATGCATTGGATGGCTGGCTGCCAGTCCGTCCGCTCAAAACAAGCGATATCGTTAG TTCTACAGGGTTGTCTGCGG
Downstream 100 bases:
>100_bases GCAGGGTCATCGTTACGGGCGCGAACGGGTTCGTCGGGCGCGCGCTCTGCCGCGCGCTGCTCGCGGCCGGGCACGAGGTT ACGGGGCTCGTGCGCCGCCG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyl Transferase Gt2B; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Glycosyltransferases-Like; Glycosyltransferase Protein; Family 2 Glycosyltransferase; Exopolysacharide Protein Glycosyl Transferase WelF; DTDP-Rhamnosyl Transferase; B-Glycosyltransferase; Glycosyltransferase WelF; Group 2 Family Glycosyltransferase; Group 2 Family Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyltransferase/Rhamnosyltransferase; EpsX Protein; Glucosyltransferase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPHSEPKFLTVSIVVYRPDVRQLTRTLSSLLVALEKLDGSRPGARTALYLVDNGGAPGSLPAFDEMLARGIDCTVINGHG NVGYGRGHNHAIERVASRYHLILNPDVDLDENALVTAIDFFDAHSDVGLVAPRVDDEQGHTQYLCRRYPTLFDLFVRGFM PAGIRNAFSRRLARYEMRDVVNATDVVWDPAIVSGCFMLFRTDVLKALGGFDARYFLYFEDYDLSLRTHDVARVAYVPRV LIRHYGGGAARKGMRHVRLFAISAYHFFNRFGWKWL
Sequences:
>Translated_276_residues MPHSEPKFLTVSIVVYRPDVRQLTRTLSSLLVALEKLDGSRPGARTALYLVDNGGAPGSLPAFDEMLARGIDCTVINGHG NVGYGRGHNHAIERVASRYHLILNPDVDLDENALVTAIDFFDAHSDVGLVAPRVDDEQGHTQYLCRRYPTLFDLFVRGFM PAGIRNAFSRRLARYEMRDVVNATDVVWDPAIVSGCFMLFRTDVLKALGGFDARYFLYFEDYDLSLRTHDVARVAYVPRV LIRHYGGGAARKGMRHVRLFAISAYHFFNRFGWKWL >Mature_275_residues PHSEPKFLTVSIVVYRPDVRQLTRTLSSLLVALEKLDGSRPGARTALYLVDNGGAPGSLPAFDEMLARGIDCTVINGHGN VGYGRGHNHAIERVASRYHLILNPDVDLDENALVTAIDFFDAHSDVGLVAPRVDDEQGHTQYLCRRYPTLFDLFVRGFMP AGIRNAFSRRLARYEMRDVVNATDVVWDPAIVSGCFMLFRTDVLKALGGFDARYFLYFEDYDLSLRTHDVARVAYVPRVL IRHYGGGAARKGMRHVRLFAISAYHFFNRFGWKWL
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31198; Mature: 31067
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSEPKFLTVSIVVYRPDVRQLTRTLSSLLVALEKLDGSRPGARTALYLVDNGGAPGSL CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC PAFDEMLARGIDCTVINGHGNVGYGRGHNHAIERVASRYHLILNPDVDLDENALVTAIDF CHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEH FDAHSDVGLVAPRVDDEQGHTQYLCRRYPTLFDLFVRGFMPAGIRNAFSRRLARYEMRDV HCCCCCCCEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VNATDVVWDPAIVSGCFMLFRTDVLKALGGFDARYFLYFEDYDLSLRTHDVARVAYVPRV HCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH LIRHYGGGAARKGMRHVRLFAISAYHFFNRFGWKWL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PHSEPKFLTVSIVVYRPDVRQLTRTLSSLLVALEKLDGSRPGARTALYLVDNGGAPGSL CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCC PAFDEMLARGIDCTVINGHGNVGYGRGHNHAIERVASRYHLILNPDVDLDENALVTAIDF CHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEH FDAHSDVGLVAPRVDDEQGHTQYLCRRYPTLFDLFVRGFMPAGIRNAFSRRLARYEMRDV HCCCCCCCEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VNATDVVWDPAIVSGCFMLFRTDVLKALGGFDARYFLYFEDYDLSLRTHDVARVAYVPRV HCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH LIRHYGGGAARKGMRHVRLFAISAYHFFNRFGWKWL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA