| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is wbiE [C]
Identifier: 53720286
GI number: 53720286
Start: 3201460
End: 3203301
Strand: Reverse
Name: wbiE [C]
Synonym: BPSL2676
Alternate gene names: 53720286
Gene position: 3203301-3201460 (Counterclockwise)
Preceding gene: 53720287
Following gene: 53720285
Centisome position: 78.62
GC content: 60.64
Gene sequence:
>1842_bases ATGCGGTTTGATATATCCGTCGTGGTGTATCGAGAGACGGAGGAAACCCTCGACGATCTTCTCGACAGCCTCGCCGCTCA AGCATCATGCCCGGATACGGTGGTTCGTGTCTGGTTGCGCAACAACGATCCCGCCGATGCCGATCGGTGGGATCGGTTCG TGCACGATCGGTCATGGTATCCATTCGAAATTTCGATCTCGCATTCTCCGCAGAACGTGGGCTTCGGGCGCGCGCACAAT GCGACGTTCGAAATGGCCGACGCTCCGTTTTTCTTTGTCTTGAATCCGGATACGCGACTGCATTCGACTGCCGTCTCGGC ATTGCGGAAGGCGATAGACACGTCTGCCGGCGACGTGGGCGCCTGGGAGTTGCGGCAACTGCCGTACGAGCATCCGAAAC TGTACGATCCCGTTTCGCTCAGCACGGACTGGGTGACAGGTGCCGCCGTCGTGTTCCGGCGTGCCGCGTTTGCGCAGGTG CGCGGTTTCGAGCCGCGTATCTTCATGTATGGGGAAGATGTCGACCTATCGTGGCGAATGCGCGCCGCGGGCTGGGTATT GCATTATGTGCCGCATGCTGTCGTCGTACACCCCACGTATTCGAAACCGATGGAGGCCAAACCGCTCCAGATCGCAGGCG GCGTGGTCGCATCGTTGCAATTGCGTACGAGGTTCGGGTCCTGGCTCGATATCGCTCGCGGTCTAGGTTGCTGGGTTGCC GAACTCGCGAGGCCGGCGCGCTTCCCGCATGCGCGGCGCACGCATCTGATGGCACTGGCTCGATATCTTCGGAGCGCAGC CTACTTCAGGCGCACGGGGGCACGGTATCGCAAAGGCGGTTTTCGCCCCGGTTTTCGTTTTTGGGGATATGGTGACCGAC GCGACGGCGCATTTTTTGCCTTCGCGGTCGAGGAACTCGACGCGCGCACGGTGCCGCTTGTCTCGATCATCGTGCGAACG CATCGCCGGCCGGCATTGTTGCGGGAGGCGCTGATGTCACTGTCGCATCAAACCTATCCGCGTGTCGAAGTCATTGTCGT CGAGGACGGCGAGCCGAATAGCCGCGCGATGATCGAGCGCGAATTTGCAGGGCGCCTTGATATCCGCTATGAGGCGACGG GCATGCCGGTAGGCAGGAGTGCCGCCGGGAATCTGGGGCTTTCGCTCGCCGCCGGGGAATGGCTGGGATTTCTTGACGAC GACGACCAGTTCTACGCAGACCACGTCGAGGCAATGATGCAGGTCGCGCGAAGCGGTACGAACCGGGCAGTCTATGGTGC GTCGCACGAGATTCCGACCGAATTTGCACAATTGACGGAAGAGGCCGCGACATATCGCGAAGAGCCCGCGTCGCTCAAGT ATCGACCATATTCCCGCCTGGCGATGTGGCAGGAGAACCTTGCGCCGATTCAAGCAGTCCTCTTTCATCGAAGCTTGTAT GACGAATTGGGCGGATTTGACGAGGACCTCGATCAACTCGAAGACTGGGTGCTGTGGGTGCGCTATTCGTGTGCGACTGA CTTCTCTTCGTTCCTGCGGGTGACATCACGCTACCGGGTGCCCATGGCGGCCAAGGTTGCCGTTGAGCGTCAGGCCAAGC TGCATGAAGCCTATGCCGTCGCCCTGGAGCGACAGCGAGCGATGCGAGTGACGCTTAGCCCGTTCGACGTTGTCGCCATG GCGGAAGAGCAGGCCCGTCGGCATGCTATCGTCCACGTTTCGAGGCAAACCGCGCGAAAGCTGATCGTGCGAGTGCCGTT CATGCGAACGTTGTTATCGAGCCAGGCGGGATGGCGACGGCGCATGAGAGCGCTATATCGTCGAATGTCGCCGCGCTCCT GA
Upstream 100 bases:
>100_bases CGACAATTCGAAGATCGTCGCTCGGAGAATCGTTCGGCGCTTGGGGTGATTCGTCGATGCCGGCGGATGCGTGTCGTGTG TCACGAAGGCAGGAATAGAG
Downstream 100 bases:
>100_bases TGCATTGGATGGCTGGCTGCCAGTCCGTCCGCTCAAAACAAGCGATATCGTTAGTTCTACAGGGTTGTCTGCGGGTGCCT CATTCCGAACCGAAATTTCT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MRFDISVVVYRETEETLDDLLDSLAAQASCPDTVVRVWLRNNDPADADRWDRFVHDRSWYPFEISISHSPQNVGFGRAHN ATFEMADAPFFFVLNPDTRLHSTAVSALRKAIDTSAGDVGAWELRQLPYEHPKLYDPVSLSTDWVTGAAVVFRRAAFAQV RGFEPRIFMYGEDVDLSWRMRAAGWVLHYVPHAVVVHPTYSKPMEAKPLQIAGGVVASLQLRTRFGSWLDIARGLGCWVA ELARPARFPHARRTHLMALARYLRSAAYFRRTGARYRKGGFRPGFRFWGYGDRRDGAFFAFAVEELDARTVPLVSIIVRT HRRPALLREALMSLSHQTYPRVEVIVVEDGEPNSRAMIEREFAGRLDIRYEATGMPVGRSAAGNLGLSLAAGEWLGFLDD DDQFYADHVEAMMQVARSGTNRAVYGASHEIPTEFAQLTEEAATYREEPASLKYRPYSRLAMWQENLAPIQAVLFHRSLY DELGGFDEDLDQLEDWVLWVRYSCATDFSSFLRVTSRYRVPMAAKVAVERQAKLHEAYAVALERQRAMRVTLSPFDVVAM AEEQARRHAIVHVSRQTARKLIVRVPFMRTLLSSQAGWRRRMRALYRRMSPRS
Sequences:
>Translated_613_residues MRFDISVVVYRETEETLDDLLDSLAAQASCPDTVVRVWLRNNDPADADRWDRFVHDRSWYPFEISISHSPQNVGFGRAHN ATFEMADAPFFFVLNPDTRLHSTAVSALRKAIDTSAGDVGAWELRQLPYEHPKLYDPVSLSTDWVTGAAVVFRRAAFAQV RGFEPRIFMYGEDVDLSWRMRAAGWVLHYVPHAVVVHPTYSKPMEAKPLQIAGGVVASLQLRTRFGSWLDIARGLGCWVA ELARPARFPHARRTHLMALARYLRSAAYFRRTGARYRKGGFRPGFRFWGYGDRRDGAFFAFAVEELDARTVPLVSIIVRT HRRPALLREALMSLSHQTYPRVEVIVVEDGEPNSRAMIEREFAGRLDIRYEATGMPVGRSAAGNLGLSLAAGEWLGFLDD DDQFYADHVEAMMQVARSGTNRAVYGASHEIPTEFAQLTEEAATYREEPASLKYRPYSRLAMWQENLAPIQAVLFHRSLY DELGGFDEDLDQLEDWVLWVRYSCATDFSSFLRVTSRYRVPMAAKVAVERQAKLHEAYAVALERQRAMRVTLSPFDVVAM AEEQARRHAIVHVSRQTARKLIVRVPFMRTLLSSQAGWRRRMRALYRRMSPRS >Mature_613_residues MRFDISVVVYRETEETLDDLLDSLAAQASCPDTVVRVWLRNNDPADADRWDRFVHDRSWYPFEISISHSPQNVGFGRAHN ATFEMADAPFFFVLNPDTRLHSTAVSALRKAIDTSAGDVGAWELRQLPYEHPKLYDPVSLSTDWVTGAAVVFRRAAFAQV RGFEPRIFMYGEDVDLSWRMRAAGWVLHYVPHAVVVHPTYSKPMEAKPLQIAGGVVASLQLRTRFGSWLDIARGLGCWVA ELARPARFPHARRTHLMALARYLRSAAYFRRTGARYRKGGFRPGFRFWGYGDRRDGAFFAFAVEELDARTVPLVSIIVRT HRRPALLREALMSLSHQTYPRVEVIVVEDGEPNSRAMIEREFAGRLDIRYEATGMPVGRSAAGNLGLSLAAGEWLGFLDD DDQFYADHVEAMMQVARSGTNRAVYGASHEIPTEFAQLTEEAATYREEPASLKYRPYSRLAMWQENLAPIQAVLFHRSLY DELGGFDEDLDQLEDWVLWVRYSCATDFSSFLRVTSRYRVPMAAKVAVERQAKLHEAYAVALERQRAMRVTLSPFDVVAM AEEQARRHAIVHVSRQTARKLIVRVPFMRTLLSSQAGWRRRMRALYRRMSPRS
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 70018; Mature: 70018
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDISVVVYRETEETLDDLLDSLAAQASCPDTVVRVWLRNNDPADADRWDRFVHDRSWY CEEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHHHCCCCC PFEISISHSPQNVGFGRAHNATFEMADAPFFFVLNPDTRLHSTAVSALRKAIDTSAGDVG CEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC AWELRQLPYEHPKLYDPVSLSTDWVTGAAVVFRRAAFAQVRGFEPRIFMYGEDVDLSWRM CHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEH RAAGWVLHYVPHAVVVHPTYSKPMEAKPLQIAGGVVASLQLRTRFGSWLDIARGLGCWVA HHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHEEEEHHHHHCHHHHHHHHHHHHHH ELARPARFPHARRTHLMALARYLRSAAYFRRTGARYRKGGFRPGFRFWGYGDRRDGAFFA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEE FAVEELDARTVPLVSIIVRTHRRPALLREALMSLSHQTYPRVEVIVVEDGEPNSRAMIER EEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH EFAGRLDIRYEATGMPVGRSAAGNLGLSLAAGEWLGFLDDDDQFYADHVEAMMQVARSGT HHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC NRAVYGASHEIPTEFAQLTEEAATYREEPASLKYRPYSRLAMWQENLAPIQAVLFHRSLY CCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DELGGFDEDLDQLEDWVLWVRYSCATDFSSFLRVTSRYRVPMAAKVAVERQAKLHEAYAV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALERQRAMRVTLSPFDVVAMAEEQARRHAIVHVSRQTARKLIVRVPFMRTLLSSQAGWRR HHHHHHHEEEECCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCHHH RMRALYRRMSPRS HHHHHHHHCCCCC >Mature Secondary Structure MRFDISVVVYRETEETLDDLLDSLAAQASCPDTVVRVWLRNNDPADADRWDRFVHDRSWY CEEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCHHHHHHHHHCCCCC PFEISISHSPQNVGFGRAHNATFEMADAPFFFVLNPDTRLHSTAVSALRKAIDTSAGDVG CEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC AWELRQLPYEHPKLYDPVSLSTDWVTGAAVVFRRAAFAQVRGFEPRIFMYGEDVDLSWRM CHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEH RAAGWVLHYVPHAVVVHPTYSKPMEAKPLQIAGGVVASLQLRTRFGSWLDIARGLGCWVA HHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHEEEEHHHHHCHHHHHHHHHHHHHH ELARPARFPHARRTHLMALARYLRSAAYFRRTGARYRKGGFRPGFRFWGYGDRRDGAFFA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEE FAVEELDARTVPLVSIIVRTHRRPALLREALMSLSHQTYPRVEVIVVEDGEPNSRAMIER EEEHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHH EFAGRLDIRYEATGMPVGRSAAGNLGLSLAAGEWLGFLDDDDQFYADHVEAMMQVARSGT HHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC NRAVYGASHEIPTEFAQLTEEAATYREEPASLKYRPYSRLAMWQENLAPIQAVLFHRSLY CCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DELGGFDEDLDQLEDWVLWVRYSCATDFSSFLRVTSRYRVPMAAKVAVERQAKLHEAYAV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALERQRAMRVTLSPFDVVAMAEEQARRHAIVHVSRQTARKLIVRVPFMRTLLSSQAGWRR HHHHHHHEEEECCCHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCHHH RMRALYRRMSPRS HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA