| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720274
Identifier: 53720274
GI number: 53720274
Start: 3187094
End: 3187978
Strand: Reverse
Name: 53720274
Synonym: BPSL2664
Alternate gene names: NA
Gene position: 3187978-3187094 (Counterclockwise)
Preceding gene: 53720275
Following gene: 53720273
Centisome position: 78.24
GC content: 68.93
Gene sequence:
>885_bases ATGAGCGAATCCCAGATCATCGAAATTGCGTCCGCCGACTGGAGCGGACAACAGCTGTCCGTGCCGCGCGAGCAACTGCT CGCGGGCCTCGAGGACGGCAAGGTGTTGTTCTTTCCGCATTTGCGCTTCGCGATCGAAGGCGGCGAGGAAGCGCTGCTCG ACCCGGCGCTCGCCGATCCGAAGCGCAAGAACATCAGCCTCGCGCCGAACGGCGGCGCGCTCGCCGGCGTGGCGGGCGAC GCGGTCACGCAGTCGGCCGTGCGCGCGCTGATCGCGCGCTTCCAGCAACAGGCGGGCGCGCTCGTCGACGGGCTCTTCCC CGAGTACCGCGGCAAGCTGCGCGTCGCGCCGACGAGCCTGCGCCTGATGCAGGTCGAGACGCGCGAGACGTCGTGGCGCA AGGACGACAGCCGGCTGCACGTCGACGCGTTCCCGTCGCGGCCGAACTACGGCGAGCGGATCCTGCGCGTGTTCACGAAC GTGAACCCGGCGGGCGTGCCTCGCGTATGGCGCGTCGGCGAGCCGTTCGAGGACGTCGCGAAGCGCTTCCTGCCGCACAT CAAGCCGCAGGTGCCGGGCGTCGCGTGGCTGCTCGAGCTGCTGCACGTGACGAAGTCGCGCCGCAGCGCGTACGACCACC TGATGCTGAAGCTGCACGACAGCATGAAGGCCGATCTCGACTATCAGAAGAACAGCCCGCAGCAGACGATGCCGTTCCCG TCCGGCAGCGTGTGGGTGTGCTTCTCCGATCAGGCGTCGCACGCGGTGATGTCCGGGCAGTTCATGCTCGAGCAGACCTT CTTCCTGCCGGTCGGCGCGATGGCCCGCCCGCAGCGCGCGCCGCTCGGCATCCTCGAGCGTCTGCAGGGCAGGGCCCTCG TTTGA
Upstream 100 bases:
>100_bases CAACGTCGTCAATCTCGGCACCGCCGGCGCGCCGCCGTCCCTTTCGCAGGCGAAGGACGCACTCGCGTCGTTCGGCCTCT TGTAATCCCGACAGGCGATC
Downstream 100 bases:
>100_bases GCGCGCGCGACGCAGTCGCGGCCGGAGCCGCCGCGCGATGCTGAGGGCGATCTATCGCGGACTGTGGTGGCTCGTCGCGC CGCTCGCGGTGCTGCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGD AVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPHIKPQVPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV
Sequences:
>Translated_294_residues MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGD AVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPHIKPQVPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV >Mature_293_residues SESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGDA VTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNV NPAGVPRVWRVGEPFEDVAKRFLPHIKPQVPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFPS GSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32627; Mature: 32496
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFPHLRFAIEGGEEALLDPALADP CCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEECEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVAGDAVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCE RLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQVPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV CCCEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure SESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFPHLRFAIEGGEEALLDPALADP CCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEECEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVAGDAVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCE RLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQVPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV CCCEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA