| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719847
Identifier: 53719847
GI number: 53719847
Start: 2698089
End: 2699135
Strand: Reverse
Name: 53719847
Synonym: BPSL2238
Alternate gene names: NA
Gene position: 2699135-2698089 (Counterclockwise)
Preceding gene: 53719848
Following gene: 53719846
Centisome position: 66.24
GC content: 70.68
Gene sequence:
>1047_bases TTGAACGACACCCCATTCACGCCGGACTGTCGCGAGGCGCAGGATTCGACGGCCGAGGCCGCGAAGACGGCGGCGCGCGC GGCGACGGAAGAGATCTTCGTATTCAACGGCGACGCGGACGGCTTGTGCGCGTTGCAGCAACTGCGGCTCGCCGAGGGAG CGGGGGCCATGCTGGTCACGGGCGTCAAGCGCGACATCCGGTTGCTGTCGCGCGTATCGGCCGGACCGGGATGCCGGGTC ACCGTGCTCGACGTGTCGCACGAGCGCAATCGCGGCGATGTCGCGCGTCTCCTCGCGGCGGGCGCCGCGCTGCGTTACTT CGATCATCACTTCGCCGGCGAACTGCCGAATCATTCGCGCTTCCATGCGTATATCGACACCGCGCCCGACGTCTGCACGA GCGTGCTCGTCGATCGCTACCTGCGGGGGCGCCATGCGGGCTGGGCCGTCGTCGCGGCGTTCGGCGACGCGCTGCCGGAC GTCGGCCGCGCGCTCGCGAGTGCGCGCGGCATCGCGCCCGGCGCGCTCGAATCGCTCGCGCAATTGGGCCGTTGCCTGAA CTACAACGCGTACGGCGAAGATCTCGACGATCTGCATTTCTCGCCCTACGCGCTCGCGGACGCGATGCTGCCGTATGCGG ACCCGCTCGACTTCATCGCCGCAACCGACGTGATGCCGGTGCTGGCCGACGGCTACCGCGACGATCTTCAGCGCGCGCGC GCGATCGAACCGGCGCTCGACGCGCCCGGCGCGACGATGCTCGTGCTGCCCGCGGAGAAATGGGCGCGCCGCGTGAGCGG CGTGCTCGCGAACGAGCGGATGGCGGAGGACGGCTGTGCTCGCGCGCTCGCGATCCTGAGCCCGCGGCGTGACGGCGGCT ATGTGGTGAGCGTGCGGGTGCGCGCCGGCAGTGCGCTCGGCGCGGACGAGTTCTGCCGGCGGTTCGAGACGGGAGGCGGG CGCAAGCTCGCGGCCGGGATCGATCGCCTTCCCGAAACCGACGTCGAACGGTTCGCCGCGCATTTCCGGGCCACCTTCGC TGCCTGA
Upstream 100 bases:
>100_bases CGCGAATTGCGAATGGGCATTCGCGCTTTGCTCATATCGATAGAAAGAGGCGATTCGCCGTCGCGGCGTCGCCTCGATTC GATGCCGAAAAGAGGATGAT
Downstream 100 bases:
>100_bases GCCGCGCGCGGCCCGCGTTCGCGCGCCCGGGGGCGCGTGCCGCTTGGGCCGCTTGGGCCGCATGAGCCGCCTGGGGCCGA TGAGGGCTCTGAAACCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: DHHA1 Domain Protein
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNDTPFTPDCREAQDSTAEAAKTAARAATEEIFVFNGDADGLCALQQLRLAEGAGAMLVTGVKRDIRLLSRVSAGPGCRV TVLDVSHERNRGDVARLLAAGAALRYFDHHFAGELPNHSRFHAYIDTAPDVCTSVLVDRYLRGRHAGWAVVAAFGDALPD VGRALASARGIAPGALESLAQLGRCLNYNAYGEDLDDLHFSPYALADAMLPYADPLDFIAATDVMPVLADGYRDDLQRAR AIEPALDAPGATMLVLPAEKWARRVSGVLANERMAEDGCARALAILSPRRDGGYVVSVRVRAGSALGADEFCRRFETGGG RKLAAGIDRLPETDVERFAAHFRATFAA
Sequences:
>Translated_348_residues MNDTPFTPDCREAQDSTAEAAKTAARAATEEIFVFNGDADGLCALQQLRLAEGAGAMLVTGVKRDIRLLSRVSAGPGCRV TVLDVSHERNRGDVARLLAAGAALRYFDHHFAGELPNHSRFHAYIDTAPDVCTSVLVDRYLRGRHAGWAVVAAFGDALPD VGRALASARGIAPGALESLAQLGRCLNYNAYGEDLDDLHFSPYALADAMLPYADPLDFIAATDVMPVLADGYRDDLQRAR AIEPALDAPGATMLVLPAEKWARRVSGVLANERMAEDGCARALAILSPRRDGGYVVSVRVRAGSALGADEFCRRFETGGG RKLAAGIDRLPETDVERFAAHFRATFAA >Mature_348_residues MNDTPFTPDCREAQDSTAEAAKTAARAATEEIFVFNGDADGLCALQQLRLAEGAGAMLVTGVKRDIRLLSRVSAGPGCRV TVLDVSHERNRGDVARLLAAGAALRYFDHHFAGELPNHSRFHAYIDTAPDVCTSVLVDRYLRGRHAGWAVVAAFGDALPD VGRALASARGIAPGALESLAQLGRCLNYNAYGEDLDDLHFSPYALADAMLPYADPLDFIAATDVMPVLADGYRDDLQRAR AIEPALDAPGATMLVLPAEKWARRVSGVLANERMAEDGCARALAILSPRRDGGYVVSVRVRAGSALGADEFCRRFETGGG RKLAAGIDRLPETDVERFAAHFRATFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37241; Mature: 37241
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTPFTPDCREAQDSTAEAAKTAARAATEEIFVFNGDADGLCALQQLRLAEGAGAMLVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCCCEEEH GVKRDIRLLSRVSAGPGCRVTVLDVSHERNRGDVARLLAAGAALRYFDHHFAGELPNHSR HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FHAYIDTAPDVCTSVLVDRYLRGRHAGWAVVAAFGDALPDVGRALASARGIAPGALESLA EEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QLGRCLNYNAYGEDLDDLHFSPYALADAMLPYADPLDFIAATDVMPVLADGYRDDLQRAR HHHHHCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH AIEPALDAPGATMLVLPAEKWARRVSGVLANERMAEDGCARALAILSPRRDGGYVVSVRV HCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE RAGSALGADEFCRRFETGGGRKLAAGIDRLPETDVERFAAHFRATFAA ECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNDTPFTPDCREAQDSTAEAAKTAARAATEEIFVFNGDADGLCALQQLRLAEGAGAMLVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCCCEEEH GVKRDIRLLSRVSAGPGCRVTVLDVSHERNRGDVARLLAAGAALRYFDHHFAGELPNHSR HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FHAYIDTAPDVCTSVLVDRYLRGRHAGWAVVAAFGDALPDVGRALASARGIAPGALESLA EEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH QLGRCLNYNAYGEDLDDLHFSPYALADAMLPYADPLDFIAATDVMPVLADGYRDDLQRAR HHHHHCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH AIEPALDAPGATMLVLPAEKWARRVSGVLANERMAEDGCARALAILSPRRDGGYVVSVRV HCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE RAGSALGADEFCRRFETGGGRKLAAGIDRLPETDVERFAAHFRATFAA ECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA