| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719846
Identifier: 53719846
GI number: 53719846
Start: 2696054
End: 2697886
Strand: Reverse
Name: 53719846
Synonym: BPSL2237
Alternate gene names: NA
Gene position: 2697886-2696054 (Counterclockwise)
Preceding gene: 53719847
Following gene: 53719842
Centisome position: 66.21
GC content: 68.74
Gene sequence:
>1833_bases ATGACGATCGGTTCGAAGACGAAGCTTGCGCTCGGCATCGCGCTGGCGATGCCCGCCGCGGCCTGGGCGTACACGTTCTA TGCGCTCGGCGACAGCCTGACCGACAATGGCCGCGTCGTCAGGCTCACCGGCATCCTGCCGAACGCGACGTCGACGATCT TTCGCGGCGGCCGCTCGTCGAACGGCCCGGTCTGGGCCGAGTATCTGCCGGGCCTGATCGGCGCGCGATTCGCGCCCGAT GACGATTACGCGATCAACGGTGCGCTGAGCGGGCACGGCGGCTATCTCAACATCATTCCGACGCGCCCGACATGGCGCAC GCTGCCCGGGTTCGCCGATCAGGTCGAGCAGTTGATCGCCGCACATCCGCGCCTGCGGCGCGACGATCTGGTCGGCGTCT GGATCGGCACCAACGATCAGGACCTGACCAAGGCGAGCCTGAACGGCATCGAGCCGTTTCTCGGCGTGCCCCGGCCGGCC AATATCGCGGAAATGAGCGCGTATACGCTAACGAACCTCAATGCGCAGTTGCAGCGTTTGATCGGCGCCGGCGCGCGTCA GTTCGTGATCCTGAACCTGAACGACGCCGGCGGCACGCGGCCCGGATACGTCGACTACAACGGCAAGCTGCCCGAGGACC TCGCGCGGTTTTCGCGGCAGGGCGTGAACGTCCATCTGTTCGACGTGTCGGCGCTGCTGAACCAGATGCGCCGCAACCCG TCGGCCTACGGGCTGAACGACACGCCGGACGTGCAGTGCCGCTACGTTCCCTCCTGCAGCGGCGGCTCGGTCGAGCTGCA GAACACCTATCTCACGGCGGACGGCACGCACATGATGACGAGCGTGCACGAGTACATCGCACGCTACCTCGCGAATCAAC TGAATGCGCCGGCCGCGATTTCGACCGCGCCGGTGCTTGGGCTCGACGTGGCGCGGGCGGGCGCGCTGTCGGCGCTGAAC GCGGCCGACGGCGGGCCGCTCGGGCCAGCGCGCGTCGCGTGGTCGGACAGGCTGTCGCTTTTCGCGGACGTCGGCTACAC GCGCAACTTTCACGGCGCGGCGGGCGGCATGAACGCATTCGATAGCGACGTCGAGATGTTCTCGATCGGCGCCGACTACA AGCTATCCGAAGCATCGAGAGCCGGTGCGCTCTTGTCGAGCGGCAATGCGAACGGCTCGCTCGCCGGCGGGCAAGGGCGG ATCGGGCTGCATGCATACCGGCTCGGCGTCTATCACGCATTCGAGCGCGCGGGCCTGTTCGTGCGCGCGTATGCCGGCGC GGGCTGGAGCCGATATCGGCTCGATCGCGCCGCCGTGCTGCCGGGCGCCGTTCGCGCGAGCACCAGCGGCTTCGATTTCG GTGCGCTCGTCAAGGCCGGATATCTGTTCGCGCTCGGCGGCGTGCGGCTCGGCCCCGTCGCCGACGTCGGCTATACGCAG CTTGTCGCGCGCGGCTACACGGAAGACGGCGATCCGATTCTCGCGCAGAACGTCGGCGTGCAGCGGCTGAAGGGCGTGAG CGCGGGAGCGGGCGTGCGCTTTGCCGCGCCGCTCGCGGCGATCGGGCTGCGCGCCGGCGAGTTGTCCGCCGAGGCGCAAC TGCGGCACGACGCATTCGGCGACCGTACGCTCGTCACCGCCCAGCGTTATGCGCCCGGTCTGCCGATCGGCACGGCCGTC GACGGCGCGAGCGCAACCTATGAGCGGCTGTCGGTCGCGCTCACCGTGAATCCCGCGAAGCGGTGGCGGGGCAAGCTCGT CGTGCAGACGGACCTCGGTACCGCGCCGCGCCGTTCGTACACGCTGCTCGCCCTGCTGGGCGGCACGTTTTGA
Upstream 100 bases:
>100_bases GCCGCCGGCTTTCAACCGTGATTCCCGACCCGGAAAAAAGGCTCGCGCACGAGCCTCGGACGACATGCATGCCCACTATC GAGGGAAGGCGCTCCGTCGC
Downstream 100 bases:
>100_bases GGGCGCGGCGCTTCGCGCCCGCGGCTAGTCGTCCGCGGCTAGTCGTCCGCGGCCGCGAAGCGCCGCGCCGCGCCGTGTGC GCCGCCGCCGACGAAGCGGA
Product: putative exported lipase
Products: NA
Alternate protein names: Esterase/Lipase/Outer Membrane Autotransporter; Outer Membrane Autotransporter Barrel; GDSL Family Lipase; Outer Membrane Autotransporter Barrel Domain Protein; G-D-S-L Family Lipolytic Protein; Lipolytic Protein G-D-S-L Family; EstA Protein; Exported Lipase
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTIGSKTKLALGIALAMPAAAWAYTFYALGDSLTDNGRVVRLTGILPNATSTIFRGGRSSNGPVWAEYLPGLIGARFAPD DDYAINGALSGHGGYLNIIPTRPTWRTLPGFADQVEQLIAAHPRLRRDDLVGVWIGTNDQDLTKASLNGIEPFLGVPRPA NIAEMSAYTLTNLNAQLQRLIGAGARQFVILNLNDAGGTRPGYVDYNGKLPEDLARFSRQGVNVHLFDVSALLNQMRRNP SAYGLNDTPDVQCRYVPSCSGGSVELQNTYLTADGTHMMTSVHEYIARYLANQLNAPAAISTAPVLGLDVARAGALSALN AADGGPLGPARVAWSDRLSLFADVGYTRNFHGAAGGMNAFDSDVEMFSIGADYKLSEASRAGALLSSGNANGSLAGGQGR IGLHAYRLGVYHAFERAGLFVRAYAGAGWSRYRLDRAAVLPGAVRASTSGFDFGALVKAGYLFALGGVRLGPVADVGYTQ LVARGYTEDGDPILAQNVGVQRLKGVSAGAGVRFAAPLAAIGLRAGELSAEAQLRHDAFGDRTLVTAQRYAPGLPIGTAV DGASATYERLSVALTVNPAKRWRGKLVVQTDLGTAPRRSYTLLALLGGTF
Sequences:
>Translated_610_residues MTIGSKTKLALGIALAMPAAAWAYTFYALGDSLTDNGRVVRLTGILPNATSTIFRGGRSSNGPVWAEYLPGLIGARFAPD DDYAINGALSGHGGYLNIIPTRPTWRTLPGFADQVEQLIAAHPRLRRDDLVGVWIGTNDQDLTKASLNGIEPFLGVPRPA NIAEMSAYTLTNLNAQLQRLIGAGARQFVILNLNDAGGTRPGYVDYNGKLPEDLARFSRQGVNVHLFDVSALLNQMRRNP SAYGLNDTPDVQCRYVPSCSGGSVELQNTYLTADGTHMMTSVHEYIARYLANQLNAPAAISTAPVLGLDVARAGALSALN AADGGPLGPARVAWSDRLSLFADVGYTRNFHGAAGGMNAFDSDVEMFSIGADYKLSEASRAGALLSSGNANGSLAGGQGR IGLHAYRLGVYHAFERAGLFVRAYAGAGWSRYRLDRAAVLPGAVRASTSGFDFGALVKAGYLFALGGVRLGPVADVGYTQ LVARGYTEDGDPILAQNVGVQRLKGVSAGAGVRFAAPLAAIGLRAGELSAEAQLRHDAFGDRTLVTAQRYAPGLPIGTAV DGASATYERLSVALTVNPAKRWRGKLVVQTDLGTAPRRSYTLLALLGGTF >Mature_609_residues TIGSKTKLALGIALAMPAAAWAYTFYALGDSLTDNGRVVRLTGILPNATSTIFRGGRSSNGPVWAEYLPGLIGARFAPDD DYAINGALSGHGGYLNIIPTRPTWRTLPGFADQVEQLIAAHPRLRRDDLVGVWIGTNDQDLTKASLNGIEPFLGVPRPAN IAEMSAYTLTNLNAQLQRLIGAGARQFVILNLNDAGGTRPGYVDYNGKLPEDLARFSRQGVNVHLFDVSALLNQMRRNPS AYGLNDTPDVQCRYVPSCSGGSVELQNTYLTADGTHMMTSVHEYIARYLANQLNAPAAISTAPVLGLDVARAGALSALNA ADGGPLGPARVAWSDRLSLFADVGYTRNFHGAAGGMNAFDSDVEMFSIGADYKLSEASRAGALLSSGNANGSLAGGQGRI GLHAYRLGVYHAFERAGLFVRAYAGAGWSRYRLDRAAVLPGAVRASTSGFDFGALVKAGYLFALGGVRLGPVADVGYTQL VARGYTEDGDPILAQNVGVQRLKGVSAGAGVRFAAPLAAIGLRAGELSAEAQLRHDAFGDRTLVTAQRYAPGLPIGTAVD GASATYERLSVALTVNPAKRWRGKLVVQTDLGTAPRRSYTLLALLGGTF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64291; Mature: 64159
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGSKTKLALGIALAMPAAAWAYTFYALGDSLTDNGRVVRLTGILPNATSTIFRGGRSS CCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCC NGPVWAEYLPGLIGARFAPDDDYAINGALSGHGGYLNIIPTRPTWRTLPGFADQVEQLIA CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHH AHPRLRRDDLVGVWIGTNDQDLTKASLNGIEPFLGVPRPANIAEMSAYTLTNLNAQLQRL HCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHCCCCCCCHHHHCEEEEECCHHHHHHH IGAGARQFVILNLNDAGGTRPGYVDYNGKLPEDLARFSRQGVNVHLFDVSALLNQMRRNP HCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHCCC SAYGLNDTPDVQCRYVPSCSGGSVELQNTYLTADGTHMMTSVHEYIARYLANQLNAPAAI CCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE STAPVLGLDVARAGALSALNAADGGPLGPARVAWSDRLSLFADVGYTRNFHGAAGGMNAF CCCCEECHHHHHHCHHHHCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCCCCCCCC DSDVEMFSIGADYKLSEASRAGALLSSGNANGSLAGGQGRIGLHAYRLGVYHAFERAGLF CCCCEEEEECCCCEECCHHHCCCEEECCCCCCEECCCCCCCEEEEEHHHHHHHHHHCCEE VRAYAGAGWSRYRLDRAAVLPGAVRASTSGFDFGALVKAGYLFALGGVRLGPVADVGYTQ EEEECCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCEEECCCCCCCHHH LVARGYTEDGDPILAQNVGVQRLKGVSAGAGVRFAAPLAAIGLRAGELSAEAQLRHDAFG HHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCC DRTLVTAQRYAPGLPIGTAVDGASATYERLSVALTVNPAKRWRGKLVVQTDLGTAPRRSY CCEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHCCEEEEEECCCCCCCCCE TLLALLGGTF EEEEEECCCC >Mature Secondary Structure TIGSKTKLALGIALAMPAAAWAYTFYALGDSLTDNGRVVRLTGILPNATSTIFRGGRSS CCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCC NGPVWAEYLPGLIGARFAPDDDYAINGALSGHGGYLNIIPTRPTWRTLPGFADQVEQLIA CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHH AHPRLRRDDLVGVWIGTNDQDLTKASLNGIEPFLGVPRPANIAEMSAYTLTNLNAQLQRL HCCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHCCCCCCCHHHHCEEEEECCHHHHHHH IGAGARQFVILNLNDAGGTRPGYVDYNGKLPEDLARFSRQGVNVHLFDVSALLNQMRRNP HCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHCCC SAYGLNDTPDVQCRYVPSCSGGSVELQNTYLTADGTHMMTSVHEYIARYLANQLNAPAAI CCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE STAPVLGLDVARAGALSALNAADGGPLGPARVAWSDRLSLFADVGYTRNFHGAAGGMNAF CCCCEECHHHHHHCHHHHCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCCCCCCCC DSDVEMFSIGADYKLSEASRAGALLSSGNANGSLAGGQGRIGLHAYRLGVYHAFERAGLF CCCCEEEEECCCCEECCHHHCCCEEECCCCCCEECCCCCCCEEEEEHHHHHHHHHHCCEE VRAYAGAGWSRYRLDRAAVLPGAVRASTSGFDFGALVKAGYLFALGGVRLGPVADVGYTQ EEEECCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCEEECCCCCCCHHH LVARGYTEDGDPILAQNVGVQRLKGVSAGAGVRFAAPLAAIGLRAGELSAEAQLRHDAFG HHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCC DRTLVTAQRYAPGLPIGTAVDGASATYERLSVALTVNPAKRWRGKLVVQTDLGTAPRRSY CCEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHHCCEEEEEECCCCCCCCCE TLLALLGGTF EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA