| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719776
Identifier: 53719776
GI number: 53719776
Start: 2604240
End: 2605187
Strand: Reverse
Name: 53719776
Synonym: BPSL2167
Alternate gene names: NA
Gene position: 2605187-2604240 (Counterclockwise)
Preceding gene: 53719784
Following gene: 53719775
Centisome position: 63.94
GC content: 72.26
Gene sequence:
>948_bases TTGCAAGAGAATGAACGACGCAGCGCCGGCTGGCCGACGCTCGCGATTCTGGTTGGCGCATCGGTATGGGGCCTGATCTG GTATCCGCTGCGCCTGCTGGCGGCGCTCGGCGTGACGGGCACGGTGGCGAGCGCGGCGACGAGCATCGTCGCGTGCGCGT TCGTGCTGATCGTGCGGCGCAAGTCGATCGCGACCGTGCGCCGGCATTGGCTGCTGCCCGCGCTGGGCGTTGCCGCGGGC GTGACGAACCTCGGCTTCGTGTGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTTTTCTATCTGACGCCCGC GTGGACCGCGATCTGCGCGCACTTCATCCTGCGCGAGCGGCTGACGGCGGCGGGCGCGGCGCTCGCCGCGCTGTCGCTCG GCGGCGCGGTGCTGATGCTGTGGTCGCCCCGGCTCGGCGTGCCGCTGCCGTCGAACCCGGCCGAATGGGCGGGGCTCGCG GCCGGAATGAGCTTCGCGATGAGCAACGTGCTCGTCGTCAAGGCGAGCCGCGAGCTGCCGCGGATGAAGCCCGAGATGCG CACGGCGACGCTGTTCGCCGGCGCGGCCGCGATGGGCGTCGCCGCCGCGTTCGTCGAGGGCCTGCCGCCGCTGCCGGCGG GCGGTGAGCTCGGCCGCGCGGCGCTGCTCGTCGTCGGGATCGGCGTGACGGTCGCGGCGAACAACATGCTCGTCCAGCAC GGCCTCGCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTCACGGCGCTCACCGCGTGGCT TTTTGCCAACGAAGTGCCGAGCGCGCGCGAATGGGCGGGCGGCCTGTGCATCGTCGTCGCGACCCTGCTGTCGAGCCGCG TGCATCGCGCCCGCCCGGCCGAAGACGAACCGCTCGAGCCGCGGGACGACGCGCGCGCGATGGTATGA
Upstream 100 bases:
>100_bases GGGCGCGGCGACGGCGCTCGATTATAGCGTGACATCGGGTGGCTCGACGCGCGGCGCGCGTGCCGCGGCGCCGTCCGGGG AAGGAAAGACGAGGTTCGGT
Downstream 100 bases:
>100_bases TTGGCCCCATTCGCGGGGCCGACTGCTTGACAGCACGGCCCCGTTTTTCGAATCTTGGGCGTGCGGCGCGCGCGCGGGCC TTCCGGCCGAATCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV
Sequences:
>Translated_315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV >Mature_315_residues MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAG VTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLA AGMSFAMSNVLVVKASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPLEPRDDARAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33199; Mature: 33199
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHHH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC EDEPLEPRDDARAMV CCCCCCCCCCCCCCC >Mature Secondary Structure MQENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELP HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCC RMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHHH GLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC EDEPLEPRDDARAMV CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA