| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719702
Identifier: 53719702
GI number: 53719702
Start: 2510636
End: 2511892
Strand: Reverse
Name: 53719702
Synonym: BPSL2091
Alternate gene names: NA
Gene position: 2511892-2510636 (Counterclockwise)
Preceding gene: 53719703
Following gene: 53719697
Centisome position: 61.65
GC content: 70.64
Gene sequence:
>1257_bases ATGAAACGACGTGATTTTCTGGCCCTGGCGAGCCTTGCCGGCGCGGCGGGCGTATCGTTGCCGGTGCCGTATGCGTTCGC TGCCGCGCAGGGCGAGACGAGCGCAACGGGGGCGATGGGAGCGGTGGGGGCGGCGGCGCGCGCCGCACGCTACTCGAACC TGCTGATTCTCGTCGAGCTCAAGGGCGGCAACGACGGGCTCAACACGGTGATTCCGTACGCGAATCCGCTGTACCGCACG CTGCGCCCGGCGATCGGCGTCAAGCGCGAGCAGGTCGTGCAGCTCGACGAGCGCGCCGCGCTGCATCCGGCGCTCGAGCC GCTCATGCCGATCTGGCGCGACGGACGGCTCGCGATCGTCGAAGGCGTCGGCTATCCGCAGCCGAATCTGTCGCACTTTC GCTCGATCGAGATCTGGGATACCGCGTCGCGCGCGAACGAGTATCTGCGCGAAGGGTGGCTCACGCGCGCGTTCGCGCAG GCGAGCGTGCCGCCCGGCTTCGCCGCGGACGGCATCGTGCTCGGCAGCGCGGAAATGGGGCCGCTCGCGAACGGCGCGCG TGCGATCGCGCTCGTGAATCCCGCGCAGTTCGCTCGCGCGGCGCGACTCGCGCAGCCCGTGTCGCTGCGTGAGCGCAACC CCGCGCTCGCGCACGTGATCGATATCGAAAACGACATCGTCAAGGCCGCCGATCGGCTGCGTCCGCATGCGGGCACGCCC GCGCTCGCGACCGCGTTTCCGGGCGGGCCGTTCGGCGCATCGGTGAAGACCGCGATGCAGGTGCTCGCCGCGTGCGATAC GCCGCAGCGTACGCCGGCGCCGGGGCAGGGCGTCGCGGTGCTGCGCCTCACGCTGAACGGCTTCGACACGCATCAGAACC AGCCCGGCCAGCAGGCGGGCTTGCTCGGCCAACTGGCGCAAGGGCTGGTGGCGATGCGCTCGGCGTTGATCGAGCTCGGG CGCTGGAACGATACGCTCGTGATGACGTATGCGGAGTTCGGCCGGCGCGCGCGAGAGAATCAGAGCAACGGAACCGATCA CGGCACGGCCGCGCCGCATTTCGTGATGGGCGGGCGCGTGCGGGGCGGGCTGTACGGCGCGCCGCCCGCGCTCGACGCGC TCGACGGCAACGGCAACCTGCCTGTCGCCGTCGATTTCCGTCAGCTTTATGCGACCGTGCTCGGCCCATGGTGGGGGCTC GACGCGGCGAGTGTGCTCAGGCAGCGTTTCGAGCCGCTGCCGTTGCTGCGCGCCTGA
Upstream 100 bases:
>100_bases GCGTATCAACTGAAGTGAAGAACATGAACACGATGACGATGAGACTCCGCGCGATGCGGCGTTGCGCGGACCGCGTCGAA TGCGAAACGAGGAAGGCAGC
Downstream 100 bases:
>100_bases TACGCGGGAGCGGGGCGTGCGCGGCGGAGGGCGGCGCGCGTCAGCGGCGCCGCGCGGCGCGCCATGCGATCCACAGCTTG CGGATCGGCGTGAGCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKRRDFLALASLAGAAGVSLPVPYAFAAAQGETSATGAMGAVGAAARAARYSNLLILVELKGGNDGLNTVIPYANPLYRT LRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQ ASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHVIDIENDIVKAADRLRPHAGTP ALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRSALIELG RWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGL DAASVLRQRFEPLPLLRA
Sequences:
>Translated_418_residues MKRRDFLALASLAGAAGVSLPVPYAFAAAQGETSATGAMGAVGAAARAARYSNLLILVELKGGNDGLNTVIPYANPLYRT LRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQ ASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHVIDIENDIVKAADRLRPHAGTP ALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRSALIELG RWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGL DAASVLRQRFEPLPLLRA >Mature_418_residues MKRRDFLALASLAGAAGVSLPVPYAFAAAQGETSATGAMGAVGAAARAARYSNLLILVELKGGNDGLNTVIPYANPLYRT LRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIVEGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQ ASVPPGFAADGIVLGSAEMGPLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHVIDIENDIVKAADRLRPHAGTP ALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAGLLGQLAQGLVAMRSALIELG RWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRVRGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGL DAASVLRQRFEPLPLLRA
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44248; Mature: 44248
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDFLALASLAGAAGVSLPVPYAFAAAQGETSATGAMGAVGAAARAARYSNLLILVEL CCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEE KGGNDGLNTVIPYANPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIV CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQASVPPGFAADGIVLGSAEMG ECCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC PLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHVIDIENDIVKAADRLRPHAGTP CCCCCCEEEEEECHHHHHHHHHHHCCCCHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCC ALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAG CCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH LLGQLAQGLVAMRSALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRV HHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC RGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGLDAASVLRQRFEPLPLLRA CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRRDFLALASLAGAAGVSLPVPYAFAAAQGETSATGAMGAVGAAARAARYSNLLILVEL CCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEE KGGNDGLNTVIPYANPLYRTLRPAIGVKREQVVQLDERAALHPALEPLMPIWRDGRLAIV CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EGVGYPQPNLSHFRSIEIWDTASRANEYLREGWLTRAFAQASVPPGFAADGIVLGSAEMG ECCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC PLANGARAIALVNPAQFARAARLAQPVSLRERNPALAHVIDIENDIVKAADRLRPHAGTP CCCCCCEEEEEECHHHHHHHHHHHCCCCHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCC ALATAFPGGPFGASVKTAMQVLAACDTPQRTPAPGQGVAVLRLTLNGFDTHQNQPGQQAG CCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH LLGQLAQGLVAMRSALIELGRWNDTLVMTYAEFGRRARENQSNGTDHGTAAPHFVMGGRV HHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC RGGLYGAPPALDALDGNGNLPVAVDFRQLYATVLGPWWGLDAASVLRQRFEPLPLLRA CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA