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The map label for this gene is yktD [H]

Identifier: 53719697

GI number: 53719697

Start: 2503503

End: 2505482

Strand: Reverse

Name: yktD [H]

Synonym: BPSL2084

Alternate gene names: 53719697

Gene position: 2505482-2503503 (Counterclockwise)

Preceding gene: 53719702

Following gene: 53719695

Centisome position: 61.49

GC content: 68.43

Gene sequence:

>1980_bases
ATGGCAGGCTCGCGAATATGCCGGTTTCGCTTGCACCTCACGCTACGTTACGTTTTATGGTTGGTTGATATCGACGACGG
GGATCGCATGCGACTCAAAATCGGCGAACTGGCGAAGAAAGTGGGACTGAGCGTCAGGGCCCTGCATCACTATGACGCAA
TCGGTTTGCTGTCGCCGTCGCAGCGCACCGATGGCGGCGCCCGTCTGTATGGGCGCGACGACCTGATTCGGCTGCATCGT
ATCGAGGCGCTGAAACGGTTCGGGTATTCGCTGCCGGCCATCCAGGCCAGCCTGGATGGCCCGCCCGCCGGCGCGCCGCT
GCAGATTCTGCGGCGCCAGATCGCGGCGCTCGACGCGCAGGCCGCGCGAGCGCAGCGCCTCAGTCGCCATCTGCAACACC
TCGTCGCCATGGTGGCCGCCGGCGGCGAGACGGCGGCGATCGACTGGCTGAACGTTTTGGAGCTGATGAACATGTACCAG
AAACATCTCGACGACAACGAGCTCGACACGCTGCTTGCCTCCGGGCCGGATACGGTCGCGCCGATGGATCCGTCGTGGGT
CGGCCTCGTCGACGAGGTCCGCGACGCCATGCGGCGGGCGCTGCCGGCCGACAGCGACGCGGCCCAGGCGCTGGCCTGGC
GTTGGAGCCGGCTGATGAACCGAATGACCCGCAATGACCCGGCGCTCGCCGGCAAGCTGATGGGGATACAGCTCGGCGAG
CCGCGCGCTCAGCACATCGTGGGCATCACGCCGGCGATGTTGACGTGGATCGGCGAGGCGTGCGCGCACGCGCGCTGTAC
GCTGTTCGCCAAGTATCTGAACCCGGCGCAGATCGCGGAGGTGCGGCGCCGCCAGCTCGCCGACACGCATATGCACGCCT
GGCTCGCGCTGGTGGCCGAGCTCAGGGCGCACATGGAGGCGGGCGTCGACGCGGGCGCCGCGCCGGTGCAGGCGATCGTC
GCGCGCTGGCAGCAGCTCTTTCGCGATAGCTTCTGCGGCGAGGACGAGGGCCTCGAGGCGAAGGTGCGCGATGCCTTGAT
GCGCGAGCCGGACTTGCAACTCGGCGGCGGCTTCGATGAGGCATTGCTCGTCTATTTGAACAAGGCGCATATCGCCGGCC
GCGACATCGCGTCGGGCGATGACGGGCCCAAGCCGAGCGCGCTGATGGTGGCGAAGCAGCGCGCCGCGCACCAACTGCTC
GACCGGCCGCTGGTGCTCGACGATCCGATCGCGTTGAGCATTCTCGGCGCGGCCGAGGAACAGGCGCTGCGCGCCGACCT
CGACCGATTCCGCTACCCGGCATCGTTGGGCATGCGCAGCTCGGTGGTCGTACGCAGCCGGCTCGCCGACGACATGCGGG
CCGAGGCCATCGGGCGCGGCGTGCGCCAGTATGTCGTCCTCGGCGCGGGGCTCGACACCAGCGCGTACCGGCATCCCGAG
GCACCGGGCCGCCTCTTCGAGGTCGACTTGCCGGCCACGCAAAGGTGGAAGCAGGCGCGCCTGCGCGAGGCCGGCATTGC
GCCGCCGCGTTCGCTGCGTTTCGTGCCGGTCGATTTCGAGCACGTGAGTCTTGCCGACGGGCTGGCGCGCGCCGGCTTCG
ATCCGGGCGCGCCCGCCTTGTTCAGTTGGCTCGGTGTGACGATGTATCTGGACGAGGCCGCGGTCGTCGAGACATTGCGC
TTCATCGCCGGCTGCGCCAAAGGCAGCGCCGTGCTGTTCGAATACGTGACGCCGCTGTCCGGCTTGCCTCCGATGATGCG
CATTGCGATGGAGCAGTTGACGGCGCAACTGGCCGCGCGCGGCGAGCCGTGGAAGTGCTTCTTCGAGCCGGCCGCGTTGG
CCGAGATGCTGGTCGGGCTGGGCTTCGGCAGCATCGGCGCCTGGAGCCCGGACGAGCTGAACCGACGTTATCTCGCGGAC
CGCGCCGACGGGCTTCACATCGGCGCGACGCCGGCGCGCCTGATTCTGGCAACCGTCTAA

Upstream 100 bases:

>100_bases
GGCCGATAGACGCATCGCGCAACCCGCGCATGATGCGGGCGGCGGTAAATTCCGCCCCGTCGTCTGACCGAATGAACGCC
GGCGTGCCGTACAGGCGCGG

Downstream 100 bases:

>100_bases
CGGCGCGTCCGGTTTCCCCGGGCGGCCGGTTCGGCCGCGGGCGCCGCCGGCCGGCGGGGCGAATCGCTATTTCGATGGCT
TCGGCTCGCGAATCACGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MAGSRICRFRLHLTLRYVLWLVDIDDGDRMRLKIGELAKKVGLSVRALHHYDAIGLLSPSQRTDGGARLYGRDDLIRLHR
IEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQ
KHLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMGIQLGE
PRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWLALVAELRAHMEAGVDAGAAPVQAIV
ARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLL
DRPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSAYRHPE
APGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDPGAPALFSWLGVTMYLDEAAVVETLR
FIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAEMLVGLGFGSIGAWSPDELNRRYLAD
RADGLHIGATPARLILATV

Sequences:

>Translated_659_residues
MAGSRICRFRLHLTLRYVLWLVDIDDGDRMRLKIGELAKKVGLSVRALHHYDAIGLLSPSQRTDGGARLYGRDDLIRLHR
IEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQ
KHLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMGIQLGE
PRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWLALVAELRAHMEAGVDAGAAPVQAIV
ARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLL
DRPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSAYRHPE
APGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDPGAPALFSWLGVTMYLDEAAVVETLR
FIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAEMLVGLGFGSIGAWSPDELNRRYLAD
RADGLHIGATPARLILATV
>Mature_658_residues
AGSRICRFRLHLTLRYVLWLVDIDDGDRMRLKIGELAKKVGLSVRALHHYDAIGLLSPSQRTDGGARLYGRDDLIRLHRI
EALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQAARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQK
HLDDNELDTLLASGPDTVAPMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMGIQLGEP
RAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWLALVAELRAHMEAGVDAGAAPVQAIVA
RWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDEALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLLD
RPLVLDDPIALSILGAAEEQALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSAYRHPEA
PGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDPGAPALFSWLGVTMYLDEAAVVETLRF
IAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAARGEPWKCFFEPAALAEMLVGLGFGSIGAWSPDELNRRYLADR
ADGLHIGATPARLILATV

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 72144; Mature: 72013

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSRICRFRLHLTLRYVLWLVDIDDGDRMRLKIGELAKKVGLSVRALHHYDAIGLLSPS
CCCCCEEHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCCHHEEHHHHCCCCCCCCC
QRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQ
CCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
AARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASGPDTVA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMGIQLGE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCC
PRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWLALVAE
CHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
ALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLLDRPLVLDDPIALSILGAAEE
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHEEEECHHHH
QALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSAYRHPE
HHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
APGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDPGAPAL
CCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHH
FSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
GEPWKCFFEPAALAEMLVGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLILATV
CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHEEEECC
>Mature Secondary Structure 
AGSRICRFRLHLTLRYVLWLVDIDDGDRMRLKIGELAKKVGLSVRALHHYDAIGLLSPS
CCCCEEHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCCHHEEHHHHCCCCCCCCC
QRTDGGARLYGRDDLIRLHRIEALKRFGYSLPAIQASLDGPPAGAPLQILRRQIAALDAQ
CCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
AARAQRLSRHLQHLVAMVAAGGETAAIDWLNVLELMNMYQKHLDDNELDTLLASGPDTVA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PMDPSWVGLVDEVRDAMRRALPADSDAAQALAWRWSRLMNRMTRNDPALAGKLMGIQLGE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCC
PRAQHIVGITPAMLTWIGEACAHARCTLFAKYLNPAQIAEVRRRQLADTHMHAWLALVAE
CHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAHMEAGVDAGAAPVQAIVARWQQLFRDSFCGEDEGLEAKVRDALMREPDLQLGGGFDE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH
ALLVYLNKAHIAGRDIASGDDGPKPSALMVAKQRAAHQLLDRPLVLDDPIALSILGAAEE
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHEEEECHHHH
QALRADLDRFRYPASLGMRSSVVVRSRLADDMRAEAIGRGVRQYVVLGAGLDTSAYRHPE
HHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
APGRLFEVDLPATQRWKQARLREAGIAPPRSLRFVPVDFEHVSLADGLARAGFDPGAPAL
CCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHH
FSWLGVTMYLDEAAVVETLRFIAGCAKGSAVLFEYVTPLSGLPPMMRIAMEQLTAQLAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
GEPWKCFFEPAALAEMLVGLGFGSIGAWSPDELNRRYLADRADGLHIGATPARLILATV
CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]