| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719683
Identifier: 53719683
GI number: 53719683
Start: 2476552
End: 2477943
Strand: Reverse
Name: 53719683
Synonym: BPSL2070
Alternate gene names: NA
Gene position: 2477943-2476552 (Counterclockwise)
Preceding gene: 53719684
Following gene: 53719682
Centisome position: 60.82
GC content: 70.33
Gene sequence:
>1392_bases TTGCTCGCCGCATGCGGGGGCGGTGGCGGGGCGGACGCAGCCGCCGCCGCGCCGCAGCAGCCGCCGCCCGCGGGGCCGAG CTCGAGCGCGAACGTCGCGATGACGCTGCCGGCCGACGCGCCGCGCATCGCTCGCGATTTCGCGGGGCTCAGCATCGAAA AGGCGGCGTTGAGCTATCCGCTGCTGAGCGGCGAGAACGGCAACATGGTCGGCCTGTTCAACCGGCTCGGCGCCGGCGTG TTGCGCATCGGCGGCAATAGCAGCGACGCGTCCGGCTGGCAGCGCACCGGTCCGGACGAGACGTCGGGCGTCATCACGCC CGCCGCCGTGGACCGGCTCGCGAGCTTCGTTCAGGCTTGCCGCTGGCGCGTGATCTACGGGCTCAATTTCGTCGGCAACG ACCCCGCGACGATCGCCGACGAAGCCGCGTATGCGGCCCAAGCGCTGGGCGTCCAGCTCGCGGGCTTCGAGATCGGCAAC GAGCCCGATCTCTACGCGCAGCATGGCCTCGCGCCGAACGCGAACACCTATCCGGGCTTCGTGAGCCGCTGGACCACATT CGCGAATGCGATCCGGGCGGCGGTGCCCGATGCGGTGTTCACGGGCCCGGCGACCGCGTGGAACTATCAGCGTTACACCG TGCCGTTCGCAAGCGATGCGGCGGGCTTGGTGTCGTTGCTGACGCAGCACCACTACCGCAACCCCGATAGCGCGACGATC GAGGCGATGCTGAGCCCCGATCCGAGCCTCGCGCCGATGCTGCAAGCGTTGCAGGGTGCGGCGAGCGCGCGCGGCATCGG CTTTCGTCTCGCGGAGACGAACAGCTATTGGGGCGGCGGCAAGCCGGGCGTGAGCGATGCGCACGCATCCGCGCTCTGGG TGATCAACTTCCTGTTCGCCGTGGCGCAAGGGGGCGCTTCGGGCGTGAACCTGCATACCGGCGGCGGAGCGTCGTATTCG GCGATCAAGACGAACAAGACCGCCGGGACGGTCGCGGCGATCGGGCCGGAGTACTACGGCATCTATCTGTTCAACCAGGC CGCGGGCGGGCGACTGATGCAAACCCGCGTCGATTCGGCGGGTACCACGCTGTTCGCGCATGCGGTCGCGGCCGACGGCG GCGGCGTGCGCCTCATCCTCGTGAATACCGATGCGAACAGCGGCTATGACGTCGCCGTCGATTGCAGCAGCGTGCCGAAC GCGCGCGCCGGCATCGTCACGACGCTCGGCGGGCCGTCGCTCGGCAGCCTGACGGGCACGCAGATCGACGGCGCGACGTT TGCGCTCGACGGGAGCGGGGCGCCGCAGGGCGGCCGGCCGGTCGCTTGCGTGAACGGCGTGCTCGGCGTGCATGTCGCGT CCGCGAGCGCGTTGCTGGTCGACTTCGCGTGA
Upstream 100 bases:
>100_bases TTACAACGACAGGAGACATAGCATGCCCCACGAATCCCCCCCGTCGTCGAAATCGCGGCGCCTTGTTTTGAAGCTGGGTG GCGGCACCGTTCTCGGCACG
Downstream 100 bases:
>100_bases GCGGGACGCACGCCGTGCGGCGCGCACGCGCGAACCGAGACGTCTCGCAGCCATCGCTCGCCCATCGGCGCAACGCGGCG GGCATGCTGCTGCGCGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGV LRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGN EPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATI EAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYS AIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPN ARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA
Sequences:
>Translated_463_residues MLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGV LRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGN EPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATI EAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYS AIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPN ARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA >Mature_463_residues MLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGV LRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGN EPDLYAQHGLAPNANTYPGFVSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATI EAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYS AIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPN ARAGIVTTLGGPSLGSLTGTQIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46699; Mature: 46699
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYP CEEECCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEHHHHCCC LLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQAC EEECCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHH RWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGF CEEEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCCCHH VSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATI HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE EAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFA EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH VAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSA HHCCCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCC GTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGT CCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCC QIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA EECCEEEEECCCCCCCCCCCCHHHCCCHHEEEECCCEEEEECC >Mature Secondary Structure MLAACGGGGGADAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYP CEEECCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEHHHHCCC LLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQAC EEECCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHH RWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGF CEEEEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCCCHH VSRWTTFANAIRAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATI HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE EAMLSPDPSLAPMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFA EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH VAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSA HHCCCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCC GTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGT CCEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCC QIDGATFALDGSGAPQGGRPVACVNGVLGVHVASASALLVDFA EECCEEEEECCCCCCCCCCCCHHHCCCHHEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA