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The map label for this gene is ompA [H]

Identifier: 53719675

GI number: 53719675

Start: 2467187

End: 2467897

Strand: Reverse

Name: ompA [H]

Synonym: BPSL2062

Alternate gene names: 53719675

Gene position: 2467897-2467187 (Counterclockwise)

Preceding gene: 53719676

Following gene: 53719674

Centisome position: 60.57

GC content: 70.18

Gene sequence:

>711_bases
ATGTTCAAGACAATTGTTCTGGCCGCTTGCGCGGCGGCCGTGCTCGGCGCCTGCACGAGCGCGACGGGACCGAGATTCAA
TGCATACGTGCTCTCCGACGCGGCCGGTGCGAAAACGTACAAGGTCGAGTGCCACGGCCTCTTCGAAGGGCCGGGCGTGT
GCCGCGACAAGGCGCGCGAGATCTGCGCGGACAAGGACGTGCACGTGCTCACGGGTGTCGGCCCGCTCGGCCACGACGAC
GATGTGCGCACGCTCGCGTTCCAGTGCGGTGAACCTGCGCAGCCCGTCGCGCAGCAGCCGCAGCCGGCTCCTGCCGCCGC
GCCGGCCGCCGAGCCGATCCGGCTGAACGCGGACGCGATGTTCGCGTTCGATCGCGCCGATGCGGCGTCGATGACCGAGC
AGGGCCGGCAGCAACTGTCGCAACTCGCGCAGCGCCTGACGGATCGGCATGCGCAGACGGTGTCGATCGTCGGCTACACC
GATCGGCTCGGCAGCGACGCGTACAACCGGCAGTTGTCGCAGGCGCGCGCGAAGACGGTCGGCGATTATCTGATCGCGGC
CGGCGTACCCGCGGACAGCGTGCACGCCGAAGGGCGCGGCGCGAGCGATCCGCTCGTGCAATGCGACCAGCGCGAGCGTG
CCGCGCTGATCGCGTGCCTCGCGCCGAATCGCCGAGTCGAAGTGGTCGCGGCGGGGCTCGACGGAGCGTGA

Upstream 100 bases:

>100_bases
GCGCATCGATGCAGTGGTAACCGAGTTCACCGGCGATTCATCGACCGGCGCGCGCCTGGCTCGGCGCGCGCTACACCGAC
TACAGACAACGAGGTAAATC

Downstream 100 bases:

>100_bases
CATGACGGCGGAACTCGACGCCCGTGTGCGCGCGCTCACGCTGCGCGCGCAGCAACTGTTCGACGACGGCCGCCCGGAGC
AGGGCGCGCTGCTCGCCGCG

Product: OmpA family protein

Products: NA

Alternate protein names: Outer membrane protein II [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MFKTIVLAACAAAVLGACTSATGPRFNAYVLSDAAGAKTYKVECHGLFEGPGVCRDKAREICADKDVHVLTGVGPLGHDD
DVRTLAFQCGEPAQPVAQQPQPAPAAAPAAEPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYT
DRLGSDAYNRQLSQARAKTVGDYLIAAGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVVAAGLDGA

Sequences:

>Translated_236_residues
MFKTIVLAACAAAVLGACTSATGPRFNAYVLSDAAGAKTYKVECHGLFEGPGVCRDKAREICADKDVHVLTGVGPLGHDD
DVRTLAFQCGEPAQPVAQQPQPAPAAAPAAEPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYT
DRLGSDAYNRQLSQARAKTVGDYLIAAGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVVAAGLDGA
>Mature_236_residues
MFKTIVLAACAAAVLGACTSATGPRFNAYVLSDAAGAKTYKVECHGLFEGPGVCRDKAREICADKDVHVLTGVGPLGHDD
DVRTLAFQCGEPAQPVAQQPQPAPAAAPAAEPIRLNADAMFAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYT
DRLGSDAYNRQLSQARAKTVGDYLIAAGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVVAAGLDGA

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=124, Percent_Identity=45.1612903225806, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 24698; Mature: 24698

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTIVLAACAAAVLGACTSATGPRFNAYVLSDAAGAKTYKVECHGLFEGPGVCRDKARE
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHH
ICADKDVHVLTGVGPLGHDDDVRTLAFQCGEPAQPVAQQPQPAPAAAPAAEPIRLNADAM
HHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCEEECCCEE
FAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHH
GDYLIAAGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVVAAGLDGA
HHHHEECCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCEEEEEEECCCCC
>Mature Secondary Structure
MFKTIVLAACAAAVLGACTSATGPRFNAYVLSDAAGAKTYKVECHGLFEGPGVCRDKARE
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHH
ICADKDVHVLTGVGPLGHDDDVRTLAFQCGEPAQPVAQQPQPAPAAAPAAEPIRLNADAM
HHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCEEECCCEE
FAFDRADAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHH
GDYLIAAGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVVAAGLDGA
HHHHEECCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1955870 [H]