| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is flbA [H]
Identifier: 53719674
GI number: 53719674
Start: 2465656
End: 2467185
Strand: Reverse
Name: flbA [H]
Synonym: BPSL2061
Alternate gene names: 53719674
Gene position: 2467185-2465656 (Counterclockwise)
Preceding gene: 53719675
Following gene: 53719673
Centisome position: 60.55
GC content: 69.8
Gene sequence:
>1530_bases ATGACGGCGGAACTCGACGCCCGTGTGCGCGCGCTCACGCTGCGCGCGCAGCAACTGTTCGACGACGGCCGCCCGGAGCA GGGCGCGCTGCTCGCCGCGCAGGCGCTCGCGCTCGCGCCGGACGACGCGCTCGCGCTGAAGCTCGTCGGTGTCGCCGAGT GCATGCGCGGCGATCATGCGGCGGGGCTCGTGTATCTCGAGCGGGCGTGCCTGTCGGCGCCCGGGGACGCGAATCTGCAC TACAACGTGGCCGTCGCGCACGAATGCACCGGCTCGCACGAGCGCGCGGCGTTGAGTTACCGCCACTGCCTGCGTCTGCA GCCCGATCATGCTGACGCGCTGTGGAACTACGGCGAATACCTGCGCCTGAACGGCCATTTCGAGGCGGCCGCGCGCTGCT TCGAGGCGCTGCAGGCGCAGGCGTGCCGCTATCCGTCGATGCATCACCGGATGGCCGTCGTCTATACGCATCTGCATCGC TTCGACGACGCGCGGCGGCATTTCGCGCTCGCGATGGACGAGAACATCGATACGCGCGTCACGCGCTGGGAGCGCGCGCA TTTGCGGCTCGGCACGCGCGACTTCGCACGCGGCTGGCCGGACTACGACACGCGCTTCGACATCGGATATCTGATCAACG TCCACTGCCATCCGTTTCCGATCCGGCTCTGGCAAGGCGAGCCGCTCGCGGGCAAGACGCTGCTCGTGCACGGCGAACAG GGGCTCGGTGACGAGATCATGTTCGCGTCGATCGTGCCGGACATTGTCCGGCAAGCGGCGCGCGTCGTGCTCGCCTGCGC GCCGTCGCTCGTCTCGCTGTTCCAGCGCGCGTTTCCGTCCGCGATCGTGCGCGCGCACCGCGCGGGCGTCGCGCCCGCGC GCGTGGACGATCTCGGGGCGATCGACTATCAGTCGCCGATCGGCAGCCTGCCGCGCTGGCTGCGCGCGAGCGAGGCATCG TTCGGCACGGGCGCGCCGTATCTGGCGGCGGACCCGGCGCGCGTCGCATGGTTCGGCGCGCGGCTGCGCGCGTTGGCGCC GCGCGCCGATCGCGCGCTGAAAGTCGGCTTGACATGGGGATCGAATCCCGCGGCGGCGGTGCCGTCCGCCGCGCGCCGCG CCACGCGCAAGAGCATGCCGCTGCGGTTGCTCGCGCCGCTCGCGCGGGTGCCGGACGTGCAGTACGTGAGCGTTCAGAAC GCCGAGCTGGGCGAGCAGGCCGCGACCGTGCCCGAGCTCGATCTGATCGATTTCAGCAGCGCGCTTCGGGATTTCGCCGA CACCGCGGCGCTCGTCGCGAATCTTGACGTCGTCGTGAGCGTCGATACGTCGGTCGCGCATCTGGCGGGCGCGCTCGGCA AGACGACCTATACGCTGCTGATGCGCAATTGCGACTGGCGATACGGATTCGAGGGCGAGCGCTGCGTCTGGTACGAATCG ATGACGCTGCTGCGCCAGACGACGCAGGACGATTGGCTGCCGGTCGTCGATCGGGTGATCGACGCGCTGGCGCGGTATCG CAAGCAATAA
Upstream 100 bases:
>100_bases CTCGTGCAATGCGACCAGCGCGAGCGTGCCGCGCTGATCGCGTGCCTCGCGCCGAATCGCCGAGTCGAAGTGGTCGCGGC GGGGCTCGACGGAGCGTGAC
Downstream 100 bases:
>100_bases GGAGAGAAACATACGCATGGATCACGATCCGCAACTGACCGAACGATGGCTGGAGATACATGCCGAAATCGAAGCGTTGC GCCGCAAGGCGAAGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLH YNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHR FDDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGYLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEAS FGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQN AELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTTYTLLMRNCDWRYGFEGERCVWYES MTLLRQTTQDDWLPVVDRVIDALARYRKQ
Sequences:
>Translated_509_residues MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLH YNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHR FDDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGYLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEAS FGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQN AELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTTYTLLMRNCDWRYGFEGERCVWYES MTLLRQTTQDDWLPVVDRVIDALARYRKQ >Mature_508_residues TAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLHY NVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRF DDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGYLINVHCHPFPIRLWQGEPLAGKTLLVHGEQG LGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEASF GTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNA ELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTTYTLLMRNCDWRYGFEGERCVWYESM TLLRQTTQDDWLPVVDRVIDALARYRKQ
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56256; Mature: 56125
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHA CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH AGLVYLERACLSAPGDANLHYNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEY HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCE LRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRFDDARRHFALAMDENIDTRV EEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRWERAHLRLGTRDFARGWPDYDTRFDIGYLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ HHHHHHHHCCCCHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEECCC GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IDYQSPIGSLPRWLRASEASFGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC SNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNAELGEQAATVPELDLIDFSS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHH ALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTTYTLLMRNCDWRYGFEGERCVWYES HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH MTLLRQTTQDDWLPVVDRVIDALARYRKQ HHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHA CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH AGLVYLERACLSAPGDANLHYNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEY HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCE LRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRFDDARRHFALAMDENIDTRV EEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRWERAHLRLGTRDFARGWPDYDTRFDIGYLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ HHHHHHHHCCCCHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEECCC GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IDYQSPIGSLPRWLRASEASFGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC SNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNAELGEQAATVPELDLIDFSS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHH ALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTTYTLLMRNCDWRYGFEGERCVWYES HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH MTLLRQTTQDDWLPVVDRVIDALARYRKQ HHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]