| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719661
Identifier: 53719661
GI number: 53719661
Start: 2449974
End: 2450531
Strand: Reverse
Name: 53719661
Synonym: BPSL2048A
Alternate gene names: NA
Gene position: 2450531-2449974 (Counterclockwise)
Preceding gene: 53719662
Following gene: 53719660
Centisome position: 60.14
GC content: 62.01
Gene sequence:
>558_bases GTGCGCGGGCTTGCGCTGCTGGGGAGTGTTGCGGCGTGCTCGCGGGCGGTGAGCGAAGTGTCGCCGCAGGCGGGCGCGAA AGGCGCGGCGGTGTCGCAGGCGGGCGACGACACGATGAGTCTGAAGCTGAATGCGTTGAACGATACGGATGTGCCGATCG GCGCATTTTACGTAGACGGTACGTGGGGCAGTACGGTTGCGTCGCGCATAGGCAGCGGTGGCGGACAAATGATCTGCTGT GCGTCTGCGCCGGGTAAGTGGCATCCCGGCTTGACTGTCACGTTGCGGTGGCAAGACGACACGCTGTACAAGAAGGACCC GGACGCGATGGCGAGCCGGGTGGTTTCCGTCGGGAAGCACGAGCATTTCTCCGACGGATTTCTATGGGTGCTGTTTTTTC CGAATGACAGGATCAAGGTGTACGCATCGCAATGGATGCCCGGTTTTCCGGGGTTCCCGGAAGGGTTGCAGACGCCGGAC AGCCCGTGTCCGGAGCACTTCACGCGTCTGAGCGACGATCCGCGCTGTTCGCAGCCTGGCAAGAGAATCAAATTATGA
Upstream 100 bases:
>100_bases GGGAGGGCGTGGGACAGTGCCGTCGTCCATGCGATCACGGATTCCGCGCTTGACGTCGGCAGTGCCTGGGCGCAGGACGA GGGAAACGATTGTTCGGTTG
Downstream 100 bases:
>100_bases ATAAGTGCTTTGTTAAATTGAATGGACTTATTGCGTTGTTTGTGTTTGCGATTTTGATGTGTGGCGGCTGTTCGCGTACA TCGCAAAGCTCGTCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MRGLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC ASAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SPCPEHFTRLSDDPRCSQPGKRIKL
Sequences:
>Translated_185_residues MRGLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC ASAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SPCPEHFTRLSDDPRCSQPGKRIKL >Mature_185_residues MRGLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDGTWGSTVASRIGSGGGQMICC ASAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKHEHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPD SPCPEHFTRLSDDPRCSQPGKRIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19801; Mature: 19801
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEECC TWGSTVASRIGSGGGQMICCASAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKH CCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC EHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPDSPCPEHFTRLSDDPRCSQPG CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC KRIKL CCCCC >Mature Secondary Structure MRGLALLGSVAACSRAVSEVSPQAGAKGAAVSQAGDDTMSLKLNALNDTDVPIGAFYVDG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCEEEEEECC TWGSTVASRIGSGGGQMICCASAPGKWHPGLTVTLRWQDDTLYKKDPDAMASRVVSVGKH CCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC EHFSDGFLWVLFFPNDRIKVYASQWMPGFPGFPEGLQTPDSPCPEHFTRLSDDPRCSQPG CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC KRIKL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA