Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719660

Identifier: 53719660

GI number: 53719660

Start: 2449384

End: 2449977

Strand: Reverse

Name: 53719660

Synonym: BPSL2048

Alternate gene names: NA

Gene position: 2449977-2449384 (Counterclockwise)

Preceding gene: 53719661

Following gene: 53719659

Centisome position: 60.13

GC content: 47.81

Gene sequence:

>594_bases
ATGAATAAGTGCTTTGTTAAATTGAATGGACTTATTGCGTTGTTTGTGTTTGCGATTTTGATGTGTGGCGGCTGTTCGCG
TACATCGCAAAGCTCGTCCGATGAAGCTGAAATGAAACATGAAGTGACATCATCCTCGGAAAGTGAGGTGATGAGTTTGA
ATTTAAATGCGCTGAATTATACGGAAATTCCAATAGGGAAATTCTATGTCGATGGCACTTGGGGCGGCAATGTCAGATCC
CGCATCGGAAGCGGTGGACTTGGCATCCTGTGTTGCGTTTCGCTGCCCAAGAAATGGCGCCCCGGATTGACTGTAACAGT
CGAGTGGCGCGACGATGAGATGTATAAAAATGATCCAAATTCATTGACAAGTCGAGTGGTTCCTGTCGAAAAGTACGAGT
ACTTCTCGGATGGATTCCTCTGGGTATTATTTTTTCCAGGCGGAAAGATTAAGGCCTATGCATCGCAATGGATGCCGGGA
TTTCCCGGGTTTCCAGAAGGGCTGCAAGCACCAAATGTAGCCTGCCCCGGGCATTTCACCTTATTGAACAGTGACCCGCG
ATGCCCCGCGCCTGATAACAGGATCAAGCCATGA

Upstream 100 bases:

>100_bases
TCCCGGAAGGGTTGCAGACGCCGGACAGCCCGTGTCCGGAGCACTTCACGCGTCTGAGCGACGATCCGCGCTGTTCGCAG
CCTGGCAAGAGAATCAAATT

Downstream 100 bases:

>100_bases
GTTATCGTTTCGCATCCGCCGACCGATTTGATGTTAATGTCGTTACGAAAGACGAGCAGGACGCTATTTTGCGGAGGCTG
CATGAAGATGACGGCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS
RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG
FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP

Sequences:

>Translated_197_residues
MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS
RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG
FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP
>Mature_197_residues
MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNYTEIPIGKFYVDGTWGGNVRS
RIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPNSLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPG
FPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDNRIKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21744; Mature: 21744

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNY
CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEE
TEIPIGKFYVDGTWGGNVRSRIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPN
EECCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC
SLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPGFPGFPEGLQAPNVACPGHFT
HHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEE
LLNSDPRCPAPDNRIKP
EECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKCFVKLNGLIALFVFAILMCGGCSRTSQSSSDEAEMKHEVTSSSESEVMSLNLNALNY
CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEE
TEIPIGKFYVDGTWGGNVRSRIGSGGLGILCCVSLPKKWRPGLTVTVEWRDDEMYKNDPN
EECCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCC
SLTSRVVPVEKYEYFSDGFLWVLFFPGGKIKAYASQWMPGFPGFPEGLQAPNVACPGHFT
HHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEE
LLNSDPRCPAPDNRIKP
EECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA