| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719659
Identifier: 53719659
GI number: 53719659
Start: 2446979
End: 2449387
Strand: Reverse
Name: 53719659
Synonym: BPSL2047
Alternate gene names: NA
Gene position: 2449387-2446979 (Counterclockwise)
Preceding gene: 53719660
Following gene: 53719658
Centisome position: 60.11
GC content: 57.49
Gene sequence:
>2409_bases ATGAGTTATCGTTTCGCATCCGCCGACCGATTTGATGTTAATGTCGTTACGAAAGACGAGCAGGACGCTATTTTGCGGAG GCTGCATGAAGATGACGGCATGGCTTGTTGTAAGACATTGCATATCGGAATCTTCTTTGATGGTACGCGTAACAACGCTG ATCGGGATAGGGGGGCGCGAACGGAAAGCAATGTGGCACGGCTTTATGCCGCTTTTCCAATAGATAAATATCACCAAGCG ATTTACGTTGCTGGAGTTGGCACGCCTTTTGTCGAGCAGATTGGTGATTTCGGTGTTGGCTTACAGGCGGCCGCAGGAGC TGCGGCAGGTTGGGCGGGAGAGGGGCGAATTAACTGGGCTTTGCTTCGGATTCACGATATTTTGCATGCGTATGTTCACG GTCAGACGTTAACGGCAGTGTTAGGAAAGCGCTACGAGGAACTCGTAAAATCGATGAGCCTCGATATGAATTTTAAGGGC ATCGACCTTGGCGGAACGCCGCCTAAACCGGGAAGCTTCGGCGATATCAAATTGCGTGCCAATTCTGGTGTGGGGGCGCT CAAGCTGATTGCTGCCGAACAGAATGGTGTCGAGCTGACTTGGGATTTAGATACGAATTGGGCGCAGCTCAAAAACGAGT TGGATTCGTCGAAGTGGAATGCAGCCGTGCAAGAATGGGACGCCAAGCGCCGTAAGGTATTGCTCGATCGTCGTGCTCAG CTAAAAGCGCGCATCGGTGATCTGCTGGTCAAGGGGAAGCCGAAGCTGCAACGCATTCGGCTATACGTATTCGGCTTTTC GCGCGGTGCAGCGGAGGCTCGCACTTTCTCGAACTGGCTTGCTGACGCGCTTGACCCCGATTTCAGTTTGTGTGGAGTGC CGGTTTCATACGATTTTCTCGGTATCTTTGATACGGTCGCATCGGTCGGCATCGCTCAGAGCGCCGCCGCAACATTATTC GACGGACATGGAGGATGGGGGCGCAAGGAACTGATGGCCGTGCCGCATTATGTGCGCCGTTGCGTGCACATGGTGGCGGC ACATGAACCTCGTGGATCATTTCCGCTCGACCTTATCGATTGTTCGATGGACGGTCGTGAGGAGATTGTCTACCCGGGTG TTCACTCGGACGTCGGCGGCGGCTATGGGCCGGGCGAACAGGGGCGCGGTCGGGACGACGCCGACAAACTTTCGCAAGTC CCGCTGCTTGATATGTACCGGGAGGCGCGTAAGGCAGGTGTGCCCTTGGATATCAATGGGCCAGGTATCGGCGCGGACGT CATCGCTGCATTCAAGGTTTCAGCAGGGCTAAAACAAGCCTTCGCAGCCTACGTAAAAAAGAGCGAGAACTATTATTACG AGAAAGATCACGGCACGCCGGGCCTAATGCGTTGCCATTACGGCTTGTATCTCCGGTGGCGCAAGATGCGGCTCAAGGAC ATGCATGCACAGCCCAGCTTCAAGGCTGCGCAGGCGCGCTATCCGCAAGATGCAGCGGATCTGGACAGTGCGAACGCGGA ATTGAAGGAGGAGTGGAACGATTTGCTGGAGGTCGAGAAAGCTGGCGGCCCGACAATCACCCGATACGTGGAGAAGTTTG TTACGAAATGGGCCAGTGAGAATCCGAAAACGGCCGCCGTCGTTTCCACGTCTCTACTTCCGGCCGCGGTCGCTGCTGAG GTTTTTGTTCCGGGGGTTAGCGCTGCGACGGTTCTATTCGGCGACAAAGTGGTGAAACTGGTGCAAGCCCAACTCAAGGA GAAGTGGGAGCAGTGGCTGCAAGTTCGCAGCGACTGGAACATGGGGCCGCCTGAACCTGCGATCAGCGCACTCTACGACA ACTACATGCACGACTCCCGCGCATGGTTCAAGCCGCTCGGCGACGATGACGACGTGTGGAACCATAGGCAGATTCAGGAA CTCAAGACCAAGCAAGCCAGCTTTGAACGCGCCCATGCTGCCTGGAAAAAGCGTGTCGAAATGGGCATGCCAAGCTTGTT GCAGGTTACACAGGCAATGGGCGTAGGTTCCACAGGATGGGGGCCCGTCGGCGGGCTTCCGCCCGAACCCGAACCCCGCT CCCCGCTCACCGCCCAGCAAGCCGATCTGCTCAAGCGCTACGACGCCGCGATGCAGTCCGCCAAGCAGGCACGCGCCGCA AAGGACCCGAACGCGCCGACGGACAGCGCCGTGCTGACCGATCCGAAGGTGACGGGCGGCCTCGCGCTGCAAACCAGCGG CCGCGAGTTCTATTTCCTGTGGGGCTTCCTGCGCTGGCGGACCGTGTTCGTGAACGGCGTGCGCTGGGACCAGCCGCGCG TGCCGACGGTGCAGGAGGAAATGGAGGGCATGCGCATGCAGATGCAGCGCCAGGTCGACATGAAGGGCATCGGCGTACTG TTCCAATGA
Upstream 100 bases:
>100_bases TTCCAGAAGGGCTGCAAGCACCAAATGTAGCCTGCCCCGGGCATTTCACCTTATTGAACAGTGACCCGCGATGCCCCGCG CCTGATAACAGGATCAAGCC
Downstream 100 bases:
>100_bases GCGAGCACGCAAGCGTGGCCGGCGATCGCGCACCGGCCGAAGCCCGCGCAATGACGCGCATCGAACGCGATCGCCGAGCG CGAGCGCACACGGGTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 801
Protein sequence:
>802_residues MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQA IYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKG IDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLF DGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQV PLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAE VFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQE LKTKQASFERAHAAWKKRVEMGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVL FQ
Sequences:
>Translated_802_residues MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQA IYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKG IDLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLF DGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQV PLLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAE VFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQE LKTKQASFERAHAAWKKRVEMGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVL FQ >Mature_801_residues SYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGARTESNVARLYAAFPIDKYHQAI YVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWALLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGI DLGGTPPKPGSFGDIKLRANSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQL KARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFLGIFDTVASVGIAQSAAATLFD GHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLIDCSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVP LLDMYREARKAGVPLDINGPGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKDM HAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASENPKTAAVVSTSLLPAAVAAEV FVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWNMGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQEL KTKQASFERAHAAWKKRVEMGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAAK DPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEEMEGMRMQMQRQVDMKGIGVLF Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88765; Mature: 88634
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGAR CCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHHEEEEEEEECCCCCCCHHCCCC TESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWA CHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEH LLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEE NSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ CCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFL HHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHH GIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLID HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE CSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDING CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEECCC PGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASE HCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWN CCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVE CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEE CCCCCCCCCCEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHEECEECCCCCCCCHHHH MEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure SYRFASADRFDVNVVTKDEQDAILRRLHEDDGMACCKTLHIGIFFDGTRNNADRDRGAR CCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHEEHHEEEEEEEECCCCCCCHHCCCC TESNVARLYAAFPIDKYHQAIYVAGVGTPFVEQIGDFGVGLQAAAGAAAGWAGEGRINWA CHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEH LLRIHDILHAYVHGQTLTAVLGKRYEELVKSMSLDMNFKGIDLGGTPPKPGSFGDIKLRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEE NSGVGALKLIAAEQNGVELTWDLDTNWAQLKNELDSSKWNAAVQEWDAKRRKVLLDRRAQ CCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LKARIGDLLVKGKPKLQRIRLYVFGFSRGAAEARTFSNWLADALDPDFSLCGVPVSYDFL HHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHH GIFDTVASVGIAQSAAATLFDGHGGWGRKELMAVPHYVRRCVHMVAAHEPRGSFPLDLID HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE CSMDGREEIVYPGVHSDVGGGYGPGEQGRGRDDADKLSQVPLLDMYREARKAGVPLDING CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEECCC PGIGADVIAAFKVSAGLKQAFAAYVKKSENYYYEKDHGTPGLMRCHYGLYLRWRKMRLKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH MHAQPSFKAAQARYPQDAADLDSANAELKEEWNDLLEVEKAGGPTITRYVEKFVTKWASE HCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NPKTAAVVSTSLLPAAVAAEVFVPGVSAATVLFGDKVVKLVQAQLKEKWEQWLQVRSDWN CCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MGPPEPAISALYDNYMHDSRAWFKPLGDDDDVWNHRQIQELKTKQASFERAHAAWKKRVE CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGMPSLLQVTQAMGVGSTGWGPVGGLPPEPEPRSPLTAQQADLLKRYDAAMQSAKQARAA HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDPNAPTDSAVLTDPKVTGGLALQTSGREFYFLWGFLRWRTVFVNGVRWDQPRVPTVQEE CCCCCCCCCCEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHEECEECCCCCCCCHHHH MEGMRMQMQRQVDMKGIGVLFQ HHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA