| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is murR [H]
Identifier: 53719602
GI number: 53719602
Start: 2372102
End: 2372983
Strand: Reverse
Name: murR [H]
Synonym: BPSL1990
Alternate gene names: 53719602
Gene position: 2372983-2372102 (Counterclockwise)
Preceding gene: 53719610
Following gene: 53719601
Centisome position: 58.24
GC content: 67.35
Gene sequence:
>882_bases ATGGACGACACGACCCCCCCGGAGACGCCGGCCGTCGACGATCTGCTGCAACGGATCGCCGGCGCCTACGACACGCTGCC GCGCCAGTTGAAGCGCATCGCCTCTTATATCGACGAGCACCGCTCGAGCGTGATGATGGACCGCACGAGCGACATCGCGC AGCGCTGCGGCGTGCACCCGTCCGCCGTCGTGCGCTTCGCGCAGCGCTTCGGCTTTTCCGGCTTTTCCGATCTGCAGGCG GTGTTCAAGGACGCCTATACGGGCCAGAACCCGACCGTGCAGAGCTACCAGCAGCGCATTCGCAGCCTGATCGACGGCGA GGCCGGCCCGATGACGGGCGGTGCGGTCGCGCGGCAGTTCATCGACGCGTCGCGCGCGGGGCTCGACGAGCTCGCGGCGG GCCTCGACGACGACCAGTTCGACGCGGCCGTGACGATGCTCGAGCGCGCGGAGAACATCTACGTGGTCGGCGTGCGGCGC TCGTTTCCGGTCGCGAGCTACATCGTCTACGCGCTGCAGCATACGGCCAAGCGCGTGCACCTCGTGTCCGGCCTCGGCGG CATGTACCGCGAGCAGATCCGCAGCGTGAAGAAGGGCGACGTGGTGATCGCGATCAGCTTCGCGCCGTACGGCAAGGAAA CGCAGTACTGCCTGCGCGCCGCGCGCCACAACCACGCGCAGACGCTCGTCGTCACCGACAGCCGCCTGTCGCCGCTCGCG CGCGACGCGAGCGCCCATTTGCTCGTGAAGGAGGGCAGCGCGTTCGCGTTCCGCTCGCTCACGAGCACGATCTGCCTGTG CCAGGCGCTGTTCATCGCGCTTGCGTACCGGCTCGAGTTGAACGTGGAAGAAGTCAAGGACATTGGAGGATACGATGACT AA
Upstream 100 bases:
>100_bases GTGCCTATACTCGCTGCACGACAAGACACGGAGCAAGGCGTCCGGCGCTTGCCCGCCGCGCGCGACGCGCGTGGGCGGGC GGCCGGGCCGACGGAGCGAC
Downstream 100 bases:
>100_bases CGCAGCACCGACGATCGACGTCGCCGTGTTCGGCGCCGGGCGCATCGGCCGCATTCATGCGGGCAATCTCGCGCGCCGGC CCGGCGTGCGCCTGAAGTAC
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: MurPQ operon repressor [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MDDTTPPETPAVDDLLQRIAGAYDTLPRQLKRIASYIDEHRSSVMMDRTSDIAQRCGVHPSAVVRFAQRFGFSGFSDLQA VFKDAYTGQNPTVQSYQQRIRSLIDGEAGPMTGGAVARQFIDASRAGLDELAAGLDDDQFDAAVTMLERAENIYVVGVRR SFPVASYIVYALQHTAKRVHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHAQTLVVTDSRLSPLA RDASAHLLVKEGSAFAFRSLTSTICLCQALFIALAYRLELNVEEVKDIGGYDD
Sequences:
>Translated_293_residues MDDTTPPETPAVDDLLQRIAGAYDTLPRQLKRIASYIDEHRSSVMMDRTSDIAQRCGVHPSAVVRFAQRFGFSGFSDLQA VFKDAYTGQNPTVQSYQQRIRSLIDGEAGPMTGGAVARQFIDASRAGLDELAAGLDDDQFDAAVTMLERAENIYVVGVRR SFPVASYIVYALQHTAKRVHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHAQTLVVTDSRLSPLA RDASAHLLVKEGSAFAFRSLTSTICLCQALFIALAYRLELNVEEVKDIGGYDD >Mature_293_residues MDDTTPPETPAVDDLLQRIAGAYDTLPRQLKRIASYIDEHRSSVMMDRTSDIAQRCGVHPSAVVRFAQRFGFSGFSDLQA VFKDAYTGQNPTVQSYQQRIRSLIDGEAGPMTGGAVARQFIDASRAGLDELAAGLDDDQFDAAVTMLERAENIYVVGVRR SFPVASYIVYALQHTAKRVHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHAQTLVVTDSRLSPLA RDASAHLLVKEGSAFAFRSLTSTICLCQALFIALAYRLELNVEEVKDIGGYDD
Specific function: Represses the expression of the murPQ operon involved in the uptake and degradation of N-acetylmuramic acid (MurNAc). Binds to two adjacent inverted repeats within the operator region. MurNAc 6-phosphate, the substrate of murQ, is the specific inducer tha
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788767, Length=234, Percent_Identity=24.3589743589744, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022821 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32230; Mature: 32230
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDTTPPETPAVDDLLQRIAGAYDTLPRQLKRIASYIDEHRSSVMMDRTSDIAQRCGVHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SAVVRFAQRFGFSGFSDLQAVFKDAYTGQNPTVQSYQQRIRSLIDGEAGPMTGGAVARQF HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IDASRAGLDELAAGLDDDQFDAAVTMLERAENIYVVGVRRSFPVASYIVYALQHTAKRVH HHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH LVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHAQTLVVTDSRLSPLA HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHH RDASAHLLVKEGSAFAFRSLTSTICLCQALFIALAYRLELNVEEVKDIGGYDD HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure MDDTTPPETPAVDDLLQRIAGAYDTLPRQLKRIASYIDEHRSSVMMDRTSDIAQRCGVHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SAVVRFAQRFGFSGFSDLQAVFKDAYTGQNPTVQSYQQRIRSLIDGEAGPMTGGAVARQF HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IDASRAGLDELAAGLDDDQFDAAVTMLERAENIYVVGVRRSFPVASYIVYALQHTAKRVH HHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH LVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHAQTLVVTDSRLSPLA HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHH RDASAHLLVKEGSAFAFRSLTSTICLCQALFIALAYRLELNVEEVKDIGGYDD HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA