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The map label for this gene is yrbE [H]

Identifier: 53719601

GI number: 53719601

Start: 2371090

End: 2372109

Strand: Reverse

Name: yrbE [H]

Synonym: BPSL1989

Alternate gene names: 53719601

Gene position: 2372109-2371090 (Counterclockwise)

Preceding gene: 53719602

Following gene: 53719600

Centisome position: 58.22

GC content: 71.57

Gene sequence:

>1020_bases
ATGACTAACGCAGCACCGACGATCGACGTCGCCGTGTTCGGCGCCGGGCGCATCGGCCGCATTCATGCGGGCAATCTCGC
GCGCCGGCCCGGCGTGCGCCTGAAGTACGTGGTCGACGTGAACCGCGACGCGGCGGCCGCGCTCGCCGCGCAGTACGGCG
CGCAGGCGGCCGACGTCGACGGCGCGCTCGGCGACGCGTCGATCGGCGCATCGGTGATCTGCTCGAGCACCGATACGCAC
GCCGAGCTGATCGTCGGCGCCGCGCGCGCGGGCAAGCACGTGTTCTGCGAGAAGCCCGTCGATCTGACGCTCGAGCGCGC
CCGCGCGTGCGAGGCGGCCGTCGCGCGGGCGGGCGTCGTCTGCATGATCGGCTTTCAGCGCCGCTTCGATCCGACTTTCG
AGGCGCTCAAGCGCCGCATCGACGCGGGCGAGATCGGCACGCCGGAGATGCTCGTCGTGACGAGCCGCGATCCGGGCGCG
CCGCCCGTCGACTACATCAAGCACTCGGGCGGCATCTTCAAGGACATGCTGATCCACGATTTCGACATCTTCCGCTGGAT
CCTCGACGACGATGCCGACACGCTGCACGCGACGGGCAGTTGCCTGACCGACCCGGCGATCGCCGGCGCGGGCGACATCG
ATTCGGCCGCGGTCACGATCCGCACGAAGCGCGGCCGGCTCTGCCAGATCAACACGTCGCGCCGCGCCGCATACGGCTAC
GATCAGCGCTTCGAAGTGCTCGGCAGCGCCGGCATGCTGCAGGCGGGCAACGTGCGGCCGACCGAGGTGACGGGCTACTC
GGCGCGCGCGGTGTCGACGGATCTGCCCGAGGCGTTCTTCCTCGAGCGCTATCGCGCCGCGTACGCGCGCGAGATCGCGC
ATTTCTTCGCGGCGGTGACGAGCGGCGAGCCGGTGCGCACGACGGTCGCCGACGGCGTGAAGGCGCTCGAGCTCGCCGAG
GCGGCGACGCTGTCGTGGCGCGAGGCCCGCGCGGTGACACTCGGCGAGCGGGCGGCCTGA

Upstream 100 bases:

>100_bases
TCGCTCACGAGCACGATCTGCCTGTGCCAGGCGCTGTTCATCGCGCTTGCGTACCGGCTCGAGTTGAACGTGGAAGAAGT
CAAGGACATTGGAGGATACG

Downstream 100 bases:

>100_bases
AGGAGCGATGCGATGACAGTCAGTCACAGCGCCGCTGCGGTGCGCATCGGCATCGCGGGGCTCGGCCGGCTCGGCCGGCG
CCACGCGGAGAACCTCGCGC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTNAAPTIDVAVFGAGRIGRIHAGNLARRPGVRLKYVVDVNRDAAAALAAQYGAQAADVDGALGDASIGASVICSSTDTH
AELIVGAARAGKHVFCEKPVDLTLERARACEAAVARAGVVCMIGFQRRFDPTFEALKRRIDAGEIGTPEMLVVTSRDPGA
PPVDYIKHSGGIFKDMLIHDFDIFRWILDDDADTLHATGSCLTDPAIAGAGDIDSAAVTIRTKRGRLCQINTSRRAAYGY
DQRFEVLGSAGMLQAGNVRPTEVTGYSARAVSTDLPEAFFLERYRAAYAREIAHFFAAVTSGEPVRTTVADGVKALELAE
AATLSWREARAVTLGERAA

Sequences:

>Translated_339_residues
MTNAAPTIDVAVFGAGRIGRIHAGNLARRPGVRLKYVVDVNRDAAAALAAQYGAQAADVDGALGDASIGASVICSSTDTH
AELIVGAARAGKHVFCEKPVDLTLERARACEAAVARAGVVCMIGFQRRFDPTFEALKRRIDAGEIGTPEMLVVTSRDPGA
PPVDYIKHSGGIFKDMLIHDFDIFRWILDDDADTLHATGSCLTDPAIAGAGDIDSAAVTIRTKRGRLCQINTSRRAAYGY
DQRFEVLGSAGMLQAGNVRPTEVTGYSARAVSTDLPEAFFLERYRAAYAREIAHFFAAVTSGEPVRTTVADGVKALELAE
AATLSWREARAVTLGERAA
>Mature_338_residues
TNAAPTIDVAVFGAGRIGRIHAGNLARRPGVRLKYVVDVNRDAAAALAAQYGAQAADVDGALGDASIGASVICSSTDTHA
ELIVGAARAGKHVFCEKPVDLTLERARACEAAVARAGVVCMIGFQRRFDPTFEALKRRIDAGEIGTPEMLVVTSRDPGAP
PVDYIKHSGGIFKDMLIHDFDIFRWILDDDADTLHATGSCLTDPAIAGAGDIDSAAVTIRTKRGRLCQINTSRRAAYGYD
QRFEVLGSAGMLQAGNVRPTEVTGYSARAVSTDLPEAFFLERYRAAYAREIAHFFAAVTSGEPVRTTVADGVKALELAEA
ATLSWREARAVTLGERAA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=189, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36024; Mature: 35893

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAAPTIDVAVFGAGRIGRIHAGNLARRPGVRLKYVVDVNRDAAAALAAQYGAQAADVD
CCCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCC
GALGDASIGASVICSSTDTHAELIVGAARAGKHVFCEKPVDLTLERARACEAAVARAGVV
CCCCCCCCCCEEEECCCCCCHHHEEEHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCEE
CMIGFQRRFDPTFEALKRRIDAGEIGTPEMLVVTSRDPGAPPVDYIKHSGGIFKDMLIHD
EEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHH
FDIFRWILDDDADTLHATGSCLTDPAIAGAGDIDSAAVTIRTKRGRLCQINTSRRAAYGY
HHHHHHEECCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCC
DQRFEVLGSAGMLQAGNVRPTEVTGYSARAVSTDLPEAFFLERYRAAYAREIAHFFAAVT
CHHHHHHCCCCCEECCCCCCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SGEPVRTTVADGVKALELAEAATLSWREARAVTLGERAA
CCCCCCHHHHHCHHHHHHHHHHHCCHHHHHEEECCCCCC
>Mature Secondary Structure 
TNAAPTIDVAVFGAGRIGRIHAGNLARRPGVRLKYVVDVNRDAAAALAAQYGAQAADVD
CCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCC
GALGDASIGASVICSSTDTHAELIVGAARAGKHVFCEKPVDLTLERARACEAAVARAGVV
CCCCCCCCCCEEEECCCCCCHHHEEEHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCEE
CMIGFQRRFDPTFEALKRRIDAGEIGTPEMLVVTSRDPGAPPVDYIKHSGGIFKDMLIHD
EEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHH
FDIFRWILDDDADTLHATGSCLTDPAIAGAGDIDSAAVTIRTKRGRLCQINTSRRAAYGY
HHHHHHEECCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCC
DQRFEVLGSAGMLQAGNVRPTEVTGYSARAVSTDLPEAFFLERYRAAYAREIAHFFAAVT
CHHHHHHCCCCCEECCCCCCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SGEPVRTTVADGVKALELAEAATLSWREARAVTLGERAA
CCCCCCHHHHHCHHHHHHHHHHHCCHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]