Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719502

Identifier: 53719502

GI number: 53719502

Start: 2249199

End: 2250905

Strand: Reverse

Name: 53719502

Synonym: BPSL1888

Alternate gene names: NA

Gene position: 2250905-2249199 (Counterclockwise)

Preceding gene: 53719503

Following gene: 53719501

Centisome position: 55.24

GC content: 70.42

Gene sequence:

>1707_bases
ATGCTGGTCGCCATCGCCGCGCTCGGCGCGGTCGACATCGGCAACGTGTTCTTCGTGCGGCGCGACTTGCAGCGGGTCGC
CGACATGGCCGCGCTCGCCGGCGCGCAGAGAATGGACGATCAGTGCGCGCAGCCGAACGCGGCGGCCGCCGCGAACGCGC
GCTCGAACGGCTTCGATCCGGCGGCGGGCGGCAACACGCTCGCGCTCGCGTGCGGGCGCTGGGATACGCAAAGCAACGCG
GGGCCGAGCTACTTCAACGCGGCCGCGACGCCGCTCAACGCGGTGCAGGTGACGGCCACGCAGAGCGTGCCGTATTTCTT
CCTCGGCCCATCGCGCACGGTGAGCGCGACGTCGACCGCGAAGGCGACCAACGTCGACCAGTTCACGATCGGCACGACGC
TCGCGAGCCTGCAGGGCGGCCTCGTGAACAATGTGCTCAATGCGTTGCTCGGCACGAACCTGGGTTTGAGCGCGCTGTCG
TATCAGGCGCTCGCGTCGACGCAGATCAAGATCGGCGACCTGATGGCGGCCGCGAACGTGCTGACCGTCAACGAGCTGCT
CGCGACGCAGGTGACGGCCGGACAGTACGCGCAACTGATGCTGACCGCGCTGTCGCGCACGCAGGTCGTGAACGCGAATC
TGCAGGCGAGCGTCGCCGCGCTGCAGGCGATCGCCGGCGCGCATCTCGGCGGCGGGACATTCAGGCTCGGCGGCCAGCCG
GGCGCGCCCGGCGTGTTCGCGCTCGGGCTGTCCGACACGCAGGCGGCCGCCGACGCGAAGATCAACGTGTTCGACGCGCT
GATGGTCGCGGCCGAAGTCGCGGCGGCGGGCAAGCCGGCCGTCGACGTCGCGACGGGGCTGCAGCTCGCGGGCCAGGGCG
CGAGGCTGAAGCTGCAGGTCATCGAGCCGCCGACGATCGTGATCGGCGAGGCGGGCACGGACCCGAAGACGGGCGCGTGG
CGCACGCAGGCGAACAATGCGCAGATTCGGTTGTATGTGAGCGTCGATCTCGGCACGACGGGCTTGTCGCCCACCGGCGT
GCTGCTGCCGATCGCGCCGCTCGTGAGCCTCGTGCAGAACCTGATCCAGGTCGATCTGAGCCTGCCGCTCACGCTGCAGG
TCGCGACGGGCTCCGCGTGGCTGCAGTCGACGAGCTGCGCGGCGAGCGCCGCCGCGAGCCGCGCGACGCTCGGCGTGCAG
CCGGGCCTCGCGAACCTGTGCATCGGCGACGTGCCGACGGATCTCCCCGCGCAGCAGACATTCGCCTGCAACGTGCCCGC
GACGCTCGCGACGCTCGGCGTGCTGAGCGCGCCGCTGCTGCAGGTCAAGTCGGCCGTCGCGCTGCCGGCGGTCGTGCCGA
AGGCGAGCGCGGCGACGCTCACGTTCAACGGCGTGGCGGGCGACGCCGACGACTATCAGACGACGAATTCGAACGCGGTG
GGCTCGGTGATCGCGAACGCGCTGTCGGGCGCCGCGCAATCGCTGACGGGATCGAACGGCCTTGCGCTCTACGTGCTCGG
CGTGTCGGTGCCGGTCGGCACGATACTCAATCCGGTGGTCTCCGTGCTGCTGAACCTGCTCGGCCCCGTGTTGAGCTCGC
TCGATCAGGTCGTCGTGCCGCTGTTGAACCTGCTCGGCGTGCAGCTCGGCGCGGCGACGGTTCACAATCTGGCGCTGACC
TGCGGCACCGCGCAAACGGTCTATTGA

Upstream 100 bases:

>100_bases
GCCGTTAGCCCGCCGCCGCGCCGAGCGCCGCCCGCCCGCCCGCGGGCGCGGGCCGATCGCGCGCGAGCGCGGCTCGTTCG
CGGTCGTCGCGGCGATCTGG

Downstream 100 bases:

>100_bases
AGATTCACGCATAACGATGAGAAACACGAACGCAATCGAAGGGCTCGATCTGTACGTCTGGGAGGGCAAGGCCGATATCG
TCGACCGGGTCGCGCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA
GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS
YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP
GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW
RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ
PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV
GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT
CGTAQTVY

Sequences:

>Translated_568_residues
MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA
GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS
YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP
GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW
RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ
PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV
GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT
CGTAQTVY
>Mature_568_residues
MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA
GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS
YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP
GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW
RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ
PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV
GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT
CGTAQTVY

Specific function: Unknown

COG id: COG4655

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56893; Mature: 56893

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDP
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
AAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTA
CCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCC
KATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANV
CCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH
LTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC
GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQV
CCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEE
IEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQN
ECCCEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
LIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQT
HHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCE
FACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH
GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVP
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNLLGVQLGAATVHNLALTCGTAQTVY
HHHHHHHHHHHHHHHHEEEEECCCCCCC
>Mature Secondary Structure
MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDP
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
AAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTA
CCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCC
KATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANV
CCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH
LTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC
GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQV
CCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEE
IEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQN
ECCCEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
LIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQT
HHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCE
FACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH
GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVP
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNLLGVQLGAATVHNLALTCGTAQTVY
HHHHHHHHHHHHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA