| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719502
Identifier: 53719502
GI number: 53719502
Start: 2249199
End: 2250905
Strand: Reverse
Name: 53719502
Synonym: BPSL1888
Alternate gene names: NA
Gene position: 2250905-2249199 (Counterclockwise)
Preceding gene: 53719503
Following gene: 53719501
Centisome position: 55.24
GC content: 70.42
Gene sequence:
>1707_bases ATGCTGGTCGCCATCGCCGCGCTCGGCGCGGTCGACATCGGCAACGTGTTCTTCGTGCGGCGCGACTTGCAGCGGGTCGC CGACATGGCCGCGCTCGCCGGCGCGCAGAGAATGGACGATCAGTGCGCGCAGCCGAACGCGGCGGCCGCCGCGAACGCGC GCTCGAACGGCTTCGATCCGGCGGCGGGCGGCAACACGCTCGCGCTCGCGTGCGGGCGCTGGGATACGCAAAGCAACGCG GGGCCGAGCTACTTCAACGCGGCCGCGACGCCGCTCAACGCGGTGCAGGTGACGGCCACGCAGAGCGTGCCGTATTTCTT CCTCGGCCCATCGCGCACGGTGAGCGCGACGTCGACCGCGAAGGCGACCAACGTCGACCAGTTCACGATCGGCACGACGC TCGCGAGCCTGCAGGGCGGCCTCGTGAACAATGTGCTCAATGCGTTGCTCGGCACGAACCTGGGTTTGAGCGCGCTGTCG TATCAGGCGCTCGCGTCGACGCAGATCAAGATCGGCGACCTGATGGCGGCCGCGAACGTGCTGACCGTCAACGAGCTGCT CGCGACGCAGGTGACGGCCGGACAGTACGCGCAACTGATGCTGACCGCGCTGTCGCGCACGCAGGTCGTGAACGCGAATC TGCAGGCGAGCGTCGCCGCGCTGCAGGCGATCGCCGGCGCGCATCTCGGCGGCGGGACATTCAGGCTCGGCGGCCAGCCG GGCGCGCCCGGCGTGTTCGCGCTCGGGCTGTCCGACACGCAGGCGGCCGCCGACGCGAAGATCAACGTGTTCGACGCGCT GATGGTCGCGGCCGAAGTCGCGGCGGCGGGCAAGCCGGCCGTCGACGTCGCGACGGGGCTGCAGCTCGCGGGCCAGGGCG CGAGGCTGAAGCTGCAGGTCATCGAGCCGCCGACGATCGTGATCGGCGAGGCGGGCACGGACCCGAAGACGGGCGCGTGG CGCACGCAGGCGAACAATGCGCAGATTCGGTTGTATGTGAGCGTCGATCTCGGCACGACGGGCTTGTCGCCCACCGGCGT GCTGCTGCCGATCGCGCCGCTCGTGAGCCTCGTGCAGAACCTGATCCAGGTCGATCTGAGCCTGCCGCTCACGCTGCAGG TCGCGACGGGCTCCGCGTGGCTGCAGTCGACGAGCTGCGCGGCGAGCGCCGCCGCGAGCCGCGCGACGCTCGGCGTGCAG CCGGGCCTCGCGAACCTGTGCATCGGCGACGTGCCGACGGATCTCCCCGCGCAGCAGACATTCGCCTGCAACGTGCCCGC GACGCTCGCGACGCTCGGCGTGCTGAGCGCGCCGCTGCTGCAGGTCAAGTCGGCCGTCGCGCTGCCGGCGGTCGTGCCGA AGGCGAGCGCGGCGACGCTCACGTTCAACGGCGTGGCGGGCGACGCCGACGACTATCAGACGACGAATTCGAACGCGGTG GGCTCGGTGATCGCGAACGCGCTGTCGGGCGCCGCGCAATCGCTGACGGGATCGAACGGCCTTGCGCTCTACGTGCTCGG CGTGTCGGTGCCGGTCGGCACGATACTCAATCCGGTGGTCTCCGTGCTGCTGAACCTGCTCGGCCCCGTGTTGAGCTCGC TCGATCAGGTCGTCGTGCCGCTGTTGAACCTGCTCGGCGTGCAGCTCGGCGCGGCGACGGTTCACAATCTGGCGCTGACC TGCGGCACCGCGCAAACGGTCTATTGA
Upstream 100 bases:
>100_bases GCCGTTAGCCCGCCGCCGCGCCGAGCGCCGCCCGCCCGCCCGCGGGCGCGGGCCGATCGCGCGCGAGCGCGGCTCGTTCG CGGTCGTCGCGGCGATCTGG
Downstream 100 bases:
>100_bases AGATTCACGCATAACGATGAGAAACACGAACGCAATCGAAGGGCTCGATCTGTACGTCTGGGAGGGCAAGGCCGATATCG TCGACCGGGTCGCGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT CGTAQTVY
Sequences:
>Translated_568_residues MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT CGTAQTVY >Mature_568_residues MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDPAAGGNTLALACGRWDTQSNA GPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTAKATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALS YQALASTQIKIGDLMAAANVLTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQVIEPPTIVIGEAGTDPKTGAW RTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQNLIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQ PGLANLCIGDVPTDLPAQQTFACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVPLLNLLGVQLGAATVHNLALT CGTAQTVY
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56893; Mature: 56893
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDP CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC AAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTA CCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCC KATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANV CCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH LTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQV CCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEE IEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQN ECCCEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQT HHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCE FACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVP HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNLLGVQLGAATVHNLALTCGTAQTVY HHHHHHHHHHHHHHHHEEEEECCCCCCC >Mature Secondary Structure MLVAIAALGAVDIGNVFFVRRDLQRVADMAALAGAQRMDDQCAQPNAAAAANARSNGFDP CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC AAGGNTLALACGRWDTQSNAGPSYFNAAATPLNAVQVTATQSVPYFFLGPSRTVSATSTA CCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCC KATNVDQFTIGTTLASLQGGLVNNVLNALLGTNLGLSALSYQALASTQIKIGDLMAAANV CCCCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHHH LTVNELLATQVTAGQYAQLMLTALSRTQVVNANLQASVAALQAIAGAHLGGGTFRLGGQP HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC GAPGVFALGLSDTQAAADAKINVFDALMVAAEVAAAGKPAVDVATGLQLAGQGARLKLQV CCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHCCCCCCEEEEEE IEPPTIVIGEAGTDPKTGAWRTQANNAQIRLYVSVDLGTTGLSPTGVLLPIAPLVSLVQN ECCCEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LIQVDLSLPLTLQVATGSAWLQSTSCAASAAASRATLGVQPGLANLCIGDVPTDLPAQQT HHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCEECCCCCHHHHEECCCCCCCCCCCE FACNVPATLATLGVLSAPLLQVKSAVALPAVVPKASAATLTFNGVAGDADDYQTTNSNAV EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH GSVIANALSGAAQSLTGSNGLALYVLGVSVPVGTILNPVVSVLLNLLGPVLSSLDQVVVP HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNLLGVQLGAATVHNLALTCGTAQTVY HHHHHHHHHHHHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA