| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719503
Identifier: 53719503
GI number: 53719503
Start: 2251015
End: 2251410
Strand: Reverse
Name: 53719503
Synonym: BPSL1889
Alternate gene names: NA
Gene position: 2251410-2251015 (Counterclockwise)
Preceding gene: 53719504
Following gene: 53719502
Centisome position: 55.26
GC content: 76.01
Gene sequence:
>396_bases ATGACGACGCATGACCTCACCCAGACTGCCGCGCCCCGCGCCGGGCGCGGCCGCGCGCTGTGCGCGGCCGCGCTCGCGCT CGCGCTTGCGTGCGCGGTGGGCGCCGCCCGCGCGCAATCGCCGCAGCGCGACGCGCCGAGCGCATCGGAAATCGGCCACG CGACGCAGACGTGGTTCGCGCTGCAGGCGAGCAACCGGGAGGCGGCGCCGGCGCAGCCGATGATCGGCGAGGCGGCGTCG CTCGCGTACGCGCGCTATATCGAGTCGTTCAGGACGAAGATCCCGGCCTTCTACGGATCGGCCGCGGGCATGAGCGGTAT GAGCGGCGGGGGCGGCGGGGGCGGCGGGGGCGGCGGCGCGGGCTATTCCCTCGCGCCGGCATCGGGTTCGCAGTGA
Upstream 100 bases:
>100_bases AGCGCCCGGCGCGGCCGCAACGGCCACGGCCGCGGCGTTCGAGCCGACGGTGCCGCTCTTGCAGCGATTCTCGCAATGAC AGACGTGACACGGAGCCGAC
Downstream 100 bases:
>100_bases GGATCGCATGCCGTTAGCCCGCCGCCGCGCCGAGCGCCGCCCGCCCGCCCGCGGGCGCGGGCCGATCGCGCGCGAGCGCG GCTCGTTCGCGGTCGTCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTTHDLTQTAAPRAGRGRALCAAALALALACAVGAARAQSPQRDAPSASEIGHATQTWFALQASNREAAPAQPMIGEAAS LAYARYIESFRTKIPAFYGSAAGMSGMSGGGGGGGGGGGAGYSLAPASGSQ
Sequences:
>Translated_131_residues MTTHDLTQTAAPRAGRGRALCAAALALALACAVGAARAQSPQRDAPSASEIGHATQTWFALQASNREAAPAQPMIGEAAS LAYARYIESFRTKIPAFYGSAAGMSGMSGGGGGGGGGGGAGYSLAPASGSQ >Mature_130_residues TTHDLTQTAAPRAGRGRALCAAALALALACAVGAARAQSPQRDAPSASEIGHATQTWFALQASNREAAPAQPMIGEAASL AYARYIESFRTKIPAFYGSAAGMSGMSGGGGGGGGGGGAGYSLAPASGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12801; Mature: 12670
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHDLTQTAAPRAGRGRALCAAALALALACAVGAARAQSPQRDAPSASEIGHATQTWFA CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHE LQASNREAAPAQPMIGEAASLAYARYIESFRTKIPAFYGSAAGMSGMSGGGGGGGGGGGA EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC GYSLAPASGSQ CCEECCCCCCC >Mature Secondary Structure TTHDLTQTAAPRAGRGRALCAAALALALACAVGAARAQSPQRDAPSASEIGHATQTWFA CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHE LQASNREAAPAQPMIGEAASLAYARYIESFRTKIPAFYGSAAGMSGMSGGGGGGGGGGGA EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC GYSLAPASGSQ CCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA