Click here to switch to the map view.

The map label for this gene is yraQ [H]

Identifier: 53719460

GI number: 53719460

Start: 2199911

End: 2200972

Strand: Reverse

Name: yraQ [H]

Synonym: BPSL1847

Alternate gene names: 53719460

Gene position: 2200972-2199911 (Counterclockwise)

Preceding gene: 53719461

Following gene: 53719459

Centisome position: 54.02

GC content: 71.47

Gene sequence:

>1062_bases
ATGAGCAGCTCCCGTTCCTATACACCGCATCCGGCGCTCGGCCTCGCGACGTTCGTCGTGCTGGCCGTCGCGGGCCTCTT
CTACGTGAAGTGGTTTCCGTATTATCACAAGGCGTTCGCCGCGGCCGAACACCATTCGATCGGCCAGTCGATCCTGATGG
GCGCCGCGGCGCACGCGCCGCAGCCGTCGCTGCAGGCGGCGCTCGATTACGCATGGGCGTACGGCAAGGCGATCTGGCAG
GCGATGGTGCTGGGCCTGCTGCTCGGTTCGGCCGTGCAGGCGCTGCTGCCCGCGCACTGGGTCGCGCGCGCGCTCGGCGG
CACGGGCTTCGGCAGCGTCGCGGCGGGGGGGCTGCTGGCGCTTCCCGGCATGATGTGCACGTGCTGCGCGGCGCCCGTCG
TCGCGGGCCTGCGCGAGCGCGACGCGTCGCCGGGCGGCGCGCTCGCGTTCTGGCTCGGCAACACCGTGCTCAATCCCGCC
GCGCTCGTGTTCATGGGCTTCGTGCTCGGCTGGCACTGGAGCGCGCTGCGGCTCGTGCTCGGCGTCGCGATGGTGTTCGG
CGTCGGTTATCTGGTCAATCGCCTGGCCGGCGCGCAGCCGCGCGTCGTCGACGATGCGCTTCGCGCGAAGCTCGTCGCCG
AGCAGGCGGCGGTCGGCAACGCGTTCGTGCGGTGGATGAAGATCTTCGCGCGGATGACCGTGCGCCTCGTGCCCGAATAC
CTGGTGCTCGTGCTGCTGCTCGGCGCGGCGCGCGCATGGCTGTTTCCGCACATCGGGCCGGACATCGGCAACGGGGTCGG
CTGGATCGTCGCGTTCGCGATCGCCGGCATGCTGTTCGTGATTCCGACCGCGGGCGAGGTGCCGATCATCCAGGCGATGC
TCTCGCTCGGCATGGGCGTTGGTCCGGCGGGCGCGCTGCTGATGACGCTGCCGCCCGTCAGCGTGCCGTCGCTCGCGATG
CTGGCGCGTTCGTTCAAGCCGGCGACGCTCGCGCTCGTCGCGGCGCTCGTCGTCGCGTTCGGCGTGGTCGGCGGGCTGGC
CGCCGTCGCGCTGGGGTTCTGA

Upstream 100 bases:

>100_bases
CGCCGCCCGCCGCGCGATGGTGCGGCGCGGCATGCGTCCGTTTTCGGCTTTCTGCTTCGATGCGCGATAACGTCAAACAC
ACGCATTCACGGCGACCAGC

Downstream 100 bases:

>100_bases
GCGGTATCGGGCCGAACCGCGAGCCGGACGACGGGCGGGCGCGTTCCCTTCGACGGGCGCGCCCGGCGTGGCCGGACGCG
GGCGCACGGGCGGAAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSSSRSYTPHPALGLATFVVLAVAGLFYVKWFPYYHKAFAAAEHHSIGQSILMGAAAHAPQPSLQAALDYAWAYGKAIWQ
AMVLGLLLGSAVQALLPAHWVARALGGTGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERDASPGGALAFWLGNTVLNPA
ALVFMGFVLGWHWSALRLVLGVAMVFGVGYLVNRLAGAQPRVVDDALRAKLVAEQAAVGNAFVRWMKIFARMTVRLVPEY
LVLVLLLGAARAWLFPHIGPDIGNGVGWIVAFAIAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPVSVPSLAM
LARSFKPATLALVAALVVAFGVVGGLAAVALGF

Sequences:

>Translated_353_residues
MSSSRSYTPHPALGLATFVVLAVAGLFYVKWFPYYHKAFAAAEHHSIGQSILMGAAAHAPQPSLQAALDYAWAYGKAIWQ
AMVLGLLLGSAVQALLPAHWVARALGGTGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERDASPGGALAFWLGNTVLNPA
ALVFMGFVLGWHWSALRLVLGVAMVFGVGYLVNRLAGAQPRVVDDALRAKLVAEQAAVGNAFVRWMKIFARMTVRLVPEY
LVLVLLLGAARAWLFPHIGPDIGNGVGWIVAFAIAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPVSVPSLAM
LARSFKPATLALVAALVVAFGVVGGLAAVALGF
>Mature_352_residues
SSSRSYTPHPALGLATFVVLAVAGLFYVKWFPYYHKAFAAAEHHSIGQSILMGAAAHAPQPSLQAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARALGGTGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERDASPGGALAFWLGNTVLNPAA
LVFMGFVLGWHWSALRLVLGVAMVFGVGYLVNRLAGAQPRVVDDALRAKLVAEQAAVGNAFVRWMKIFARMTVRLVPEYL
VLVLLLGAARAWLFPHIGPDIGNGVGWIVAFAIAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPVSVPSLAML
ARSFKPATLALVAALVVAFGVVGGLAAVALGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=347, Percent_Identity=51.5850144092219, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36573; Mature: 36442

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSRSYTPHPALGLATFVVLAVAGLFYVKWFPYYHKAFAAAEHHSIGQSILMGAAAHAP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC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CCHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]