| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is tas [H]
Identifier: 53719461
GI number: 53719461
Start: 2201328
End: 2202380
Strand: Reverse
Name: tas [H]
Synonym: BPSL1848
Alternate gene names: 53719461
Gene position: 2202380-2201328 (Counterclockwise)
Preceding gene: 53719462
Following gene: 53719460
Centisome position: 54.05
GC content: 66.86
Gene sequence:
>1053_bases ATGGAATACCGCACACTCGGCGATTCAGGCGTCAAAGTCAGCCTGATTGGTCTCGGCACGATGACCTGGGGCGAGCAAAA CACCGAAAGCGACGCGCATGCGCAACTCGATTACGCGATCGACCAGGGCGTCACGCTGATCGACACCGCCGAGATGTATC CGGTGCCGCCTAAGGCGCAAACGCAGGGCCGCACGGAAACGTATCTCGGCACGTGGCTCGCGAAGCACCCGGCGCTGCGC GAGAAGCTGACGATCGCGACGAAGATCGCCGGCCCCGCGCGCCAGCCGCACAACCCGACGCACATTCGCGGCGCGGGCAA CCAGTTCGACCGCAAGAACCTGACCGAGGCGCTCGACGGCAGCCTGGCGCGCCTGCGCACCGATTACGTCGACTTGTACC AGCTGCATTGGCCGGATCGCAGCACGACGACGTTCGGCCGCCCCGCGTATCCGTGGATCGACGATCCGTACACGGTGCCG ATCGAAGAGACGCTCGCCGTCCTCGGCGATTTCGTCAAGGCGGGCAAGGTGCGCCATGTCGGCGTATCGAACGAGACGCC GTGGGGCGTCGCGCAATTCCTCCGCGCAGCCGAGAAGCTCGGCCTGCCGCGCATCGTCAGCATCCAGAATCCGTACAGCC TGCTGAACCGCACGTTCGAGAACGGCTTGTCGGAGTTCAGCCACCGCGAGCGCATCGGGCTGCTCGCGTATTCGCCGCTC GCGTTCGGCTGGCTGTCGGGCAAGTACGAAGGCGGCGCGCGCCCCGAGGGCGCGCGCATCACGCGGTTCGAGCGCTTCCA GCGCTACAGCAAGCCGCACGCGGTGCAGGCGACGTCGCGCTACGTCGCGCTCGCGAGGCGGCATGGATTATCGCCCGCCC AGCTCGCGCTCGCGTTCGTCAACAGTCGGCCGTTCGTGACGAGCAACCTGATCGGCGCGACGTCGCTCGCGCAATTGCGT GAAAACGTCGCCAGCGTCGACGTGAAGCTCGCGCCCGAGATCCTCGCCGAGATCGACGCGCTCCACGAACAGCAGCCGAA CCCCGCGCCGTAG
Upstream 100 bases:
>100_bases CGAGCGCTGCGCCGGCAGCGGCTGCGCGGCAAGGCTCTGAAGCAATCGTTTCGATGTGTTAGCTTCGGATCTTTGTCTCC GAAGCGACAGGAGCTTCAGC
Downstream 100 bases:
>100_bases CGGCATCGGCGATCGGGCGGGCGCCGGCTGGGCGGCGCTCGGCGATGGCGCGCCGCCGCGGCCCGCCGCCTTGCCGGCCC TCCGGATGCGCGGCCGGGCG
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MEYRTLGDSGVKVSLIGLGTMTWGEQNTESDAHAQLDYAIDQGVTLIDTAEMYPVPPKAQTQGRTETYLGTWLAKHPALR EKLTIATKIAGPARQPHNPTHIRGAGNQFDRKNLTEALDGSLARLRTDYVDLYQLHWPDRSTTTFGRPAYPWIDDPYTVP IEETLAVLGDFVKAGKVRHVGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLLNRTFENGLSEFSHRERIGLLAYSPL AFGWLSGKYEGGARPEGARITRFERFQRYSKPHAVQATSRYVALARRHGLSPAQLALAFVNSRPFVTSNLIGATSLAQLR ENVASVDVKLAPEILAEIDALHEQQPNPAP
Sequences:
>Translated_350_residues MEYRTLGDSGVKVSLIGLGTMTWGEQNTESDAHAQLDYAIDQGVTLIDTAEMYPVPPKAQTQGRTETYLGTWLAKHPALR EKLTIATKIAGPARQPHNPTHIRGAGNQFDRKNLTEALDGSLARLRTDYVDLYQLHWPDRSTTTFGRPAYPWIDDPYTVP IEETLAVLGDFVKAGKVRHVGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLLNRTFENGLSEFSHRERIGLLAYSPL AFGWLSGKYEGGARPEGARITRFERFQRYSKPHAVQATSRYVALARRHGLSPAQLALAFVNSRPFVTSNLIGATSLAQLR ENVASVDVKLAPEILAEIDALHEQQPNPAP >Mature_350_residues MEYRTLGDSGVKVSLIGLGTMTWGEQNTESDAHAQLDYAIDQGVTLIDTAEMYPVPPKAQTQGRTETYLGTWLAKHPALR EKLTIATKIAGPARQPHNPTHIRGAGNQFDRKNLTEALDGSLARLRTDYVDLYQLHWPDRSTTTFGRPAYPWIDDPYTVP IEETLAVLGDFVKAGKVRHVGVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLLNRTFENGLSEFSHRERIGLLAYSPL AFGWLSGKYEGGARPEGARITRFERFQRYSKPHAVQATSRYVALARRHGLSPAQLALAFVNSRPFVTSNLIGATSLAQLR ENVASVDVKLAPEILAEIDALHEQQPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=363, Percent_Identity=31.129476584022, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI4504825, Length=361, Percent_Identity=31.0249307479224, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI27436964, Length=360, Percent_Identity=30.2777777777778, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI27436962, Length=360, Percent_Identity=30.2777777777778, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI27436966, Length=360, Percent_Identity=30, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI27436971, Length=362, Percent_Identity=30.6629834254144, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI223718702, Length=326, Percent_Identity=26.6871165644172, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI41327764, Length=336, Percent_Identity=26.7857142857143, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI41152114, Length=331, Percent_Identity=25.9818731117825, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=56.2857142857143, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI87081735, Length=360, Percent_Identity=29.1666666666667, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1789375, Length=348, Percent_Identity=31.8965517241379, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788070, Length=340, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788081, Length=356, Percent_Identity=28.6516853932584, Blast_Score=86, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6325169, Length=363, Percent_Identity=26.7217630853994, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6323998, Length=343, Percent_Identity=24.198250728863, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=321, Percent_Identity=24.6105919003115, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=269, Percent_Identity=24.5353159851301, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319951, Length=344, Percent_Identity=22.3837209302326, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324694, Length=248, Percent_Identity=28.2258064516129, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646159, Length=252, Percent_Identity=31.3492063492063, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646155, Length=335, Percent_Identity=27.7611940298507, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38748; Mature: 38748
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRTLGDSGVKVSLIGLGTMTWGEQNTESDAHAQLDYAIDQGVTLIDTAEMYPVPPKAQ CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCC TQGRTETYLGTWLAKHPALREKLTIATKIAGPARQPHNPTHIRGAGNQFDRKNLTEALDG CCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCC SLARLRTDYVDLYQLHWPDRSTTTFGRPAYPWIDDPYTVPIEETLAVLGDFVKAGKVRHV HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLLNRTFENGLSEFSHRERIGLLAYSPL CCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCH AFGWLSGKYEGGARPEGARITRFERFQRYSKPHAVQATSRYVALARRHGLSPAQLALAFV HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVTSNLIGATSLAQLRENVASVDVKLAPEILAEIDALHEQQPNPAP CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEYRTLGDSGVKVSLIGLGTMTWGEQNTESDAHAQLDYAIDQGVTLIDTAEMYPVPPKAQ CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCC TQGRTETYLGTWLAKHPALREKLTIATKIAGPARQPHNPTHIRGAGNQFDRKNLTEALDG CCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCC SLARLRTDYVDLYQLHWPDRSTTTFGRPAYPWIDDPYTVPIEETLAVLGDFVKAGKVRHV HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRAAEKLGLPRIVSIQNPYSLLNRTFENGLSEFSHRERIGLLAYSPL CCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCH AFGWLSGKYEGGARPEGARITRFERFQRYSKPHAVQATSRYVALARRHGLSPAQLALAFV HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVTSNLIGATSLAQLRENVASVDVKLAPEILAEIDALHEQQPNPAP CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]