| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is kgtP [H]
Identifier: 53719438
GI number: 53719438
Start: 2173005
End: 2174309
Strand: Reverse
Name: kgtP [H]
Synonym: BPSL1825
Alternate gene names: 53719438
Gene position: 2174309-2173005 (Counterclockwise)
Preceding gene: 53719439
Following gene: 53719437
Centisome position: 53.36
GC content: 66.97
Gene sequence:
>1305_bases ATGAATGACCAGACCGCCGTCGCCGCCGCTGCGCGGCAGGACGTCCGACGCCGCGTGCTCGCGATCGTCGGCGCTTCGTC GGGCAACCTCGTCGAGTGGTTCGACTTCTACATCTACTCGTTCTGCGCGCTGTATTTCGCGCCCGCGTTTTTCCCGAGCG GGAACACGACCACGCAGCTTCTCAACACCGCGGGCGTGTTCGCCGCGGGCTTCCTGATGCGGCCGATCGGCGGCTGGCTG TTCGGCCGGATCGCCGACAAGCACGGCCGGCGCGCCGCGATGATGATCTCGGTGCTGATGATGTGCGGCGGCTCGCTCGT GATCGCGGTGCTGCCGACGTATGCGCAGATCGGCGCGCTCGCGCCGTTGCTGCTGCTCGTCGCACGGCTGTTCCAGGGGC TCTCGGTGGGCGGCGAGTACGGCACGAGCGCGACGTACATGAGCGAGGTCGCGCTCCAGGGCCGGCGCGGCTTCTTCGCG TCGTTCCAGTACGTGACGCTGATCGGCGGCCAGCTCTGCGCGCTGCTCGTGCTCGTGATCCTGCAGCAGACGCTTTCGAG CGACGCGCTCAAGGCTTGGGGGTGGCGGATTCCGTTCGTCGTCGGCGCGGCGGCCGCGCTGATCTCGCTGTATCTGCGCA AGTCGCTCGACGAGACGTCGACGAGCGAATCGCGCAAGGCGAAGGACGCCGGCACGATCCGCGGCGTGTGGCAGCACAAG GGCGCGTTCCTGACGGTGGTCGGCTTCACGGCGGGCGGCTCGCTGATCTTCTACACGTTCACGACCTACATGCAGAAGTA CCTCGTCAACACGGCCGGCATGCATGCGAAGACGGCGAGCAACGTGATGACGGCCGCGCTCTTCGTCTACATGCTGATGC AGCCGATGTTCGGCGCGCTGTCCGACAAGATCGGCCGCCGCATGTCGATGATCCTGTTCGGCACGGGCGCCGTGATCGGC ACGGTGCCGCTGATGCACGCGCTGGGCGGCGTGACGAGCCCGCTCGCCGCATTCGGGCTGATCGTCGTCGCGCTCGCGAT CGTCAGCTTCTACACGTCGATCAGCGGCCTCATCAAGGCCGAAATGTTTCCGCCCGAGGTGCGCGCGATGGGCGTCGGCC TGTCGTACGCGGTCGCCAACGCGATCTTCGGCGGCTCGGCCGAATATGTCGCGCTGTGGTTCAAGTCGGTCGGCAGCGAA TCGAGCTTCTACTGGTACGTGACCGTGCTCTGCGCGATCTCGCTGCTCGTGTCGTGGCGGATGCGCGATCCGAGCCGGGA AGGCTACCTGCGCAACGAGCCCTGA
Upstream 100 bases:
>100_bases GCCACGCCAAGATGGAACCGGTATCACCGCGTGCGTTTCACAAGAAGGCGGCAACCGTCACCGCCAGGCCATCCAGAGAA CTTCAAGGAACAGACCATCC
Downstream 100 bases:
>100_bases GCGGGGCTCGGCCGCGCGGCGGGCGGCGTCCGGTTCGGCGCCCGCCGCGCGGCGCGTTTGCCGGGCGCGGCCGGGGGCTC GCGCCGCGCATGCAGACGGC
Product: putative ABC transporter permease
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNDQTAVAAAARQDVRRRVLAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADKHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPLLLLVARLFQGLSVGGEYGTSATYMSEVALQGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSSDALKAWGWRIPFVVGAAAALISLYLRKSLDETSTSESRKAKDAGTIRGVWQHK GAFLTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTAALFVYMLMQPMFGALSDKIGRRMSMILFGTGAVIG TVPLMHALGGVTSPLAAFGLIVVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE SSFYWYVTVLCAISLLVSWRMRDPSREGYLRNEP
Sequences:
>Translated_434_residues MNDQTAVAAAARQDVRRRVLAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADKHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPLLLLVARLFQGLSVGGEYGTSATYMSEVALQGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSSDALKAWGWRIPFVVGAAAALISLYLRKSLDETSTSESRKAKDAGTIRGVWQHK GAFLTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTAALFVYMLMQPMFGALSDKIGRRMSMILFGTGAVIG TVPLMHALGGVTSPLAAFGLIVVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE SSFYWYVTVLCAISLLVSWRMRDPSREGYLRNEP >Mature_434_residues MNDQTAVAAAARQDVRRRVLAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQLLNTAGVFAAGFLMRPIGGWL FGRIADKHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGALAPLLLLVARLFQGLSVGGEYGTSATYMSEVALQGRRGFFA SFQYVTLIGGQLCALLVLVILQQTLSSDALKAWGWRIPFVVGAAAALISLYLRKSLDETSTSESRKAKDAGTIRGVWQHK GAFLTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTAALFVYMLMQPMFGALSDKIGRRMSMILFGTGAVIG TVPLMHALGGVTSPLAAFGLIVVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSE SSFYWYVTVLCAISLLVSWRMRDPSREGYLRNEP
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=414, Percent_Identity=71.4975845410628, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI1790550, Length=416, Percent_Identity=27.8846153846154, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1788292, Length=418, Percent_Identity=29.6650717703349, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1789941, Length=424, Percent_Identity=31.6037735849057, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI87082231, Length=317, Percent_Identity=27.1293375394322, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI87082404, Length=313, Percent_Identity=26.517571884984, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 46727; Mature: 46727
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQTAVAAAARQDVRRRVLAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQL CCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADKHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APLLLLVARLFQGLSVGGEYGTSATYMSEVALQGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSSDALKAWGWRIPFVVGAAAALISLYLRKSLDETSTSESRKAKDAGTIRGVWQHK HHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHCC GAFLTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTAALFVYMLMQPMFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRMSMILFGTGAVIGTVPLMHALGGVTSPLAAFGLIVVALAIVSFYTSISGLIKA HHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSESSFYWYVTVLCAISLLVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MRDPSREGYLRNEP CCCCCCCCCCCCCC >Mature Secondary Structure MNDQTAVAAAARQDVRRRVLAIVGASSGNLVEWFDFYIYSFCALYFAPAFFPSGNTTTQL CCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNTAGVFAAGFLMRPIGGWLFGRIADKHGRRAAMMISVLMMCGGSLVIAVLPTYAQIGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH APLLLLVARLFQGLSVGGEYGTSATYMSEVALQGRRGFFASFQYVTLIGGQLCALLVLVI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LQQTLSSDALKAWGWRIPFVVGAAAALISLYLRKSLDETSTSESRKAKDAGTIRGVWQHK HHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHCC GAFLTVVGFTAGGSLIFYTFTTYMQKYLVNTAGMHAKTASNVMTAALFVYMLMQPMFGAL CCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SDKIGRRMSMILFGTGAVIGTVPLMHALGGVTSPLAAFGLIVVALAIVSFYTSISGLIKA HHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMFPPEVRAMGVGLSYAVANAIFGGSAEYVALWFKSVGSESSFYWYVTVLCAISLLVSWR CCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MRDPSREGYLRNEP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]