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The map label for this gene is ycgB [H]

Identifier: 53719439

GI number: 53719439

Start: 2174784

End: 2176310

Strand: Reverse

Name: ycgB [H]

Synonym: BPSL1826

Alternate gene names: 53719439

Gene position: 2176310-2174784 (Counterclockwise)

Preceding gene: 53719440

Following gene: 53719438

Centisome position: 53.41

GC content: 62.21

Gene sequence:

>1527_bases
ATGAACGTTGCCGACCGCAAACCGTTGCCGTGTCCGTCCGATTGGACGTTCGAGCTGATCGAGGAGTACGACACCCACAT
CTCGCAGGTCGCGGAGCAGTACGAGCTCGACATCTATCCGATCCAGCTCGAGCTGATCAGCGCCGAGCAGATGATGGACG
CGTACGCGTCGGTGGGAATGCCCGTGAACTACCGTCACTGGTCGTTCGGCAAGCACTTCCTGTCGACCGAGAAGAGCTAC
CGCCGCGGGCAGATGGGGCTCGCGTACGAGATCGTCATCAACTCGAACCCGTGCATCGCGTATCTGATGGAAGAGAACAC
GATGACGATGCAGGCGCTCGTCATCGCGCACGCGGCGTACGGGCACAACTCGTTCTTCAAGGGCAACTACCTGTTCCGGC
TGTGGACCGACGCGCACGCGATCATCGATTATCTCGTGTACGCGAAGAACTACGTCGCCGAATGCGAGGAGCGCTACGGG
CTCGATCGCGTCGAGGAACTGCTCGACTCGTGCCACGCGCTGATGAATTACGGCGTCGACCGCTACAAGCGGCCGCAGAA
GCCGTCGCTCGCGAAGGAATCCGAGCTCAGGCGCGAGCGCGAGGCGTATCTGCAGTCGCAGGTCAACGAGCTGTGGCGCA
CGCTGCCCGCGAAGAAGCCCGAGTTCGCCGACGAGGAGCAGGAAGAGCGCTATCCGCCCGAGCCGCAGGAAAACCTGCTG
TATTTCGCGGAGAAGAACGCGCCGTTCCTCGAACCGTGGGAGCGCGAGGTGATCCGGATCGTGCGCAAGATCGGCCAGTA
CTTCTATCCGCAGCGGCAGACGCAGGTGATGAACGAGGGTTGGGCGACGTTCTGGCACTACACGCTGCTCAACACGATGT
ACAACCAGGGCAAGCTCGCGGACGGCTTCATGATGGAGTTCCTCCATTCGCACAGCAACGTGATCTACCAGCCGCCCGTG
ACGAAGCCGTACTACAGCGGGATCAATCCGTACGCGCTCGGCTTTTCGATGATGAGCGACATCCGCCGGATCTGCGAGGC
GCCGACCGAAGAGGACCACAAGTGGTTCCCCGAGCTCGCGGGCAGCCCGTGGCTGCCGGCGCTTCACTATGCGATGCGCA
ACTTCAAGGACGAGAGCTTCATCGCGCAATACCTGTCGCCGCATCTGATCCGCGAGATGCGCCTGTTCTCGGTGCTCGAC
GACGACATGCGCGACGCGCTCGAGGTGTCGGCGATCCACGACGATTCCGGCTATCAGTACGTGCGGCAGGCGTTGTCGCG
GCAGTACGACATCCATCATCGCGAGCCGAACATCCAGGTGTGGTCGGTCAACACGCGCGGCGACCGCAGCCTCACGCTGC
GCCATTTCATGACCGACAACCGGCATCTGTCGAACGACAGCGAAGAGGTGCTCAAGCACATGGCGCGGCTCTGGCAGTTC
GACGTGTACCTCGAGAGCGTCGACGAGACGGGGACGGTCCGCAAGCGCTACGAGTGCCGCTATACCGCGCCGGAAATCCG
GCTCTGA

Upstream 100 bases:

>100_bases
CGACGAAGCGTCGGGGGCCGCCGCGCACGAGCGCGACGCATCGCCCGAAGCGGCGGCGCAGCACCCAGAAGCGCCCGCGA
GCGGGCTCAAGGAAGCGCGT

Downstream 100 bases:

>100_bases
CGGACGACGGGGCGGCGCGCGCCGGCGGCCGGGCCCGCGCGTCCGGCCGCCGCGAAGCTGGATCGGCCGGAGCGATCGAG
CCGGCTCGGCCGCGTCGCTT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MNVADRKPLPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSY
RRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYG
LDRVEELLDSCHALMNYGVDRYKRPQKPSLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLL
YFAEKNAPFLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPV
TKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLD
DDMRDALEVSAIHDDSGYQYVRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQF
DVYLESVDETGTVRKRYECRYTAPEIRL

Sequences:

>Translated_508_residues
MNVADRKPLPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSY
RRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYG
LDRVEELLDSCHALMNYGVDRYKRPQKPSLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLL
YFAEKNAPFLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPV
TKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLD
DDMRDALEVSAIHDDSGYQYVRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQF
DVYLESVDETGTVRKRYECRYTAPEIRL
>Mature_508_residues
MNVADRKPLPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSY
RRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYG
LDRVEELLDSCHALMNYGVDRYKRPQKPSLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLL
YFAEKNAPFLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPV
TKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLD
DDMRDALEVSAIHDDSGYQYVRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQF
DVYLESVDETGTVRKRYECRYTAPEIRL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=495, Percent_Identity=64.2424242424242, Blast_Score=692, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60219; Mature: 60219

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVADRKPLPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCC
PVNYRHWSFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAY
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
GHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVD
CCCCEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH
RYKRPQKPSLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCEE
YFAEKNAPFLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLA
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DGFMMEFLHSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELA
HHHHHHHHHHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQY
CCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHH
VRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQF
HHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DVYLESVDETGTVRKRYECRYTAPEIRL
HHHHHHCCCCCCHHHHHCEEECCCCCCC
>Mature Secondary Structure
MNVADRKPLPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHCCC
PVNYRHWSFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAY
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
GHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVD
CCCCEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH
RYKRPQKPSLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCEE
YFAEKNAPFLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLA
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DGFMMEFLHSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELA
HHHHHHHHHHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQY
CCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHH
VRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQF
HHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DVYLESVDETGTVRKRYECRYTAPEIRL
HHHHHHCCCCCCHHHHHCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]