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The map label for this gene is hofQ [C]

Identifier: 53719431

GI number: 53719431

Start: 2165512

End: 2166831

Strand: Reverse

Name: hofQ [C]

Synonym: BPSL1818

Alternate gene names: 53719431

Gene position: 2166831-2165512 (Counterclockwise)

Preceding gene: 53719432

Following gene: 53719430

Centisome position: 53.18

GC content: 70.3

Gene sequence:

>1320_bases
ATGGCGGTGGCGCCGAGATTCGCCCGCGCGGCGGACCTCGGCCCGGTGCTGGCCGTGCCCGCCGGCGGCGGCGAGATGGT
GAAGCTGCCGGCGCCGGCGGTCGCGGTGTTCGTCGCGGACCCGGACGTCGCCGACGTGCACGTGCCGACGCCGCAGGCGG
TGTTCGTGCTCGGCAAGAAAGCCGGCACGACGACGCTCTTCGCGCTCGGCGCGAACAACCGGACGATCCTGCGCGAGACG
GTCGTCGTCGATGTCGATACGCCGTCGCTGCAGCGCATTCTCGATGCGCGCTTTCCGCAACTGCGCCTGACGCTCGCGGG
CGCGCCGGGCTCGCTGATGGTGAGCGGCCGCGTGCCGAGCGCGGCGGACGCGGACGCCGTCGTGCAGACGCTCAAGCCGT
ACCTGCGCCAGCAGGAAGCGCTCGTCAACCGGCTCACGCTCGCGCGGCCGATCCAGGTGCACCTGCGCGTGCGCATCACC
GAGGTCGACCGCAACATCACGCAGCAGCTCGGCATCAACTGGAGCGCGCTCGGCGCGAGCGGCAACTTCGTCGGCGGCCT
GTTCAACGGGCGCACGCTGTTCGACACGGCGTCGAAGGCGTTCGATCTGTCGCCGTCGGGCGCGTTCTCGGTGGTGGGCG
GCTTTCACACGTCGCGCTACTCGATCGACGGCGTGCTCGACGCGCTCGATCAGGAAGGCCTCATCACGATGCTCGCCGAG
CCGAACCTGACCGCGATCTCCGGCCAGACCGCGAGCTTCCTCGCGGGCGGCGAGTTTCCGATTCCGGTCGCGCAGGACAC
GACGGGCGCGATCACGATCCAGTTCAAGCCATATGGCGTGTCGCTCGACTTCACGCCGACCGTGCTCGCCGACAACCGGA
TCAGCCTCAAGGTGCGCCCGGAGGTGAGCGAGATCGATCCGACCAACAGCGTGACGACGGGCAGCATCAAGGTGCCGGCG
CTGACGGTGCGCCGCGTCGACACGACGGTCGAGCTGTCGAGCGGGCAGAGCTTCGCGATCGGCGGGCTCCTGCAGAGCAA
GAGCAGCGACGTGCTCGCCGAGCTGCCGGGCCTCGCGCGGCTGCCCGTGCTCGGCAAGCTGTTCTCGTCGCGCAACTACC
TGAACGACAAGACCGAGGTCGTCGTGATCGTCACGCCCTACATCGTGCAGCCGGCGAACCCGGGCGAGCTGCGCGACGCG
CTCGACGACGTCACGCGCCCGAGCAGCGACATCGAGTTCGTGCTGCAGCGCTCGCTCGGCATCGATCCGCTCGGCGGCGA
TGCGCCGCGGCTCGCGGGCCCGGCGGGGTTCGTCTACTGA

Upstream 100 bases:

>100_bases
GCGGCGGCAAGCCGCATCGGCATCGCCGCGCGCGCGGGCGTTCGCGGCGGCGCGGCGCGCGGCCGCCGCGGCGTTGTGGT
GGCTCGCGCTCGCGCTGGGC

Downstream 100 bases:

>100_bases
CGACGGAAGACAAGAGGGACACGGAGGCATTCGATGGCGATTCGACCGGAACACACCACGCGCCGGCGCGCGTCGCGCGC
GGTGGCCGCGTGCGCGGCGC

Product: putative fimbriae assembly-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MAVAPRFARAADLGPVLAVPAGGGEMVKLPAPAVAVFVADPDVADVHVPTPQAVFVLGKKAGTTTLFALGANNRTILRET
VVVDVDTPSLQRILDARFPQLRLTLAGAPGSLMVSGRVPSAADADAVVQTLKPYLRQQEALVNRLTLARPIQVHLRVRIT
EVDRNITQQLGINWSALGASGNFVGGLFNGRTLFDTASKAFDLSPSGAFSVVGGFHTSRYSIDGVLDALDQEGLITMLAE
PNLTAISGQTASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRPEVSEIDPTNSVTTGSIKVPA
LTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLARLPVLGKLFSSRNYLNDKTEVVVIVTPYIVQPANPGELRDA
LDDVTRPSSDIEFVLQRSLGIDPLGGDAPRLAGPAGFVY

Sequences:

>Translated_439_residues
MAVAPRFARAADLGPVLAVPAGGGEMVKLPAPAVAVFVADPDVADVHVPTPQAVFVLGKKAGTTTLFALGANNRTILRET
VVVDVDTPSLQRILDARFPQLRLTLAGAPGSLMVSGRVPSAADADAVVQTLKPYLRQQEALVNRLTLARPIQVHLRVRIT
EVDRNITQQLGINWSALGASGNFVGGLFNGRTLFDTASKAFDLSPSGAFSVVGGFHTSRYSIDGVLDALDQEGLITMLAE
PNLTAISGQTASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRPEVSEIDPTNSVTTGSIKVPA
LTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLARLPVLGKLFSSRNYLNDKTEVVVIVTPYIVQPANPGELRDA
LDDVTRPSSDIEFVLQRSLGIDPLGGDAPRLAGPAGFVY
>Mature_438_residues
AVAPRFARAADLGPVLAVPAGGGEMVKLPAPAVAVFVADPDVADVHVPTPQAVFVLGKKAGTTTLFALGANNRTILRETV
VVDVDTPSLQRILDARFPQLRLTLAGAPGSLMVSGRVPSAADADAVVQTLKPYLRQQEALVNRLTLARPIQVHLRVRITE
VDRNITQQLGINWSALGASGNFVGGLFNGRTLFDTASKAFDLSPSGAFSVVGGFHTSRYSIDGVLDALDQEGLITMLAEP
NLTAISGQTASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRPEVSEIDPTNSVTTGSIKVPAL
TVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLARLPVLGKLFSSRNYLNDKTEVVVIVTPYIVQPANPGELRDAL
DDVTRPSSDIEFVLQRSLGIDPLGGDAPRLAGPAGFVY

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=380, Percent_Identity=28.4210526315789, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI87082242, Length=460, Percent_Identity=23.2608695652174, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 46222; Mature: 46091

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAPRFARAADLGPVLAVPAGGGEMVKLPAPAVAVFVADPDVADVHVPTPQAVFVLGKK
CCCCCCCHHHCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCEEECCCCCEEEEEECC
AGTTTLFALGANNRTILRETVVVDVDTPSLQRILDARFPQLRLTLAGAPGSLMVSGRVPS
CCCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCC
AADADAVVQTLKPYLRQQEALVNRLTLARPIQVHLRVRITEVDRNITQQLGINWSALGAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHCCCEEEECCC
GNFVGGLFNGRTLFDTASKAFDLSPSGAFSVVGGFHTSRYSIDGVLDALDQEGLITMLAE
CCEEEEECCCCEEECCCCHHEECCCCCCEEEEECCCCCEEEHHHHHHHCCCCCEEEEEEC
PNLTAISGQTASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRP
CCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEECEEEECCCCEEEECCEEEEEECC
EVSEIDPTNSVTTGSIKVPALTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLAR
CHHHCCCCCCEEECEEECCEEEEEEECEEEEECCCCEEEEEEEECCCCCCHHHHCCCCCC
LPVLGKLFSSRNYLNDKTEVVVIVTPYIVQPANPGELRDALDDVTRPSSDIEFVLQRSLG
CHHHHHHHHCCCCCCCCCCEEEEEECEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
IDPLGGDAPRLAGPAGFVY
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVAPRFARAADLGPVLAVPAGGGEMVKLPAPAVAVFVADPDVADVHVPTPQAVFVLGKK
CCCCCCHHHCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCEEECCCCCEEEEEECC
AGTTTLFALGANNRTILRETVVVDVDTPSLQRILDARFPQLRLTLAGAPGSLMVSGRVPS
CCCEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCC
AADADAVVQTLKPYLRQQEALVNRLTLARPIQVHLRVRITEVDRNITQQLGINWSALGAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHHCCCEEEECCC
GNFVGGLFNGRTLFDTASKAFDLSPSGAFSVVGGFHTSRYSIDGVLDALDQEGLITMLAE
CCEEEEECCCCEEECCCCHHEECCCCCCEEEEECCCCCEEEHHHHHHHCCCCCEEEEEEC
PNLTAISGQTASFLAGGEFPIPVAQDTTGAITIQFKPYGVSLDFTPTVLADNRISLKVRP
CCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEECEEEECCCCEEEECCEEEEEECC
EVSEIDPTNSVTTGSIKVPALTVRRVDTTVELSSGQSFAIGGLLQSKSSDVLAELPGLAR
CHHHCCCCCCEEECEEECCEEEEEEECEEEEECCCCEEEEEEEECCCCCCHHHHCCCCCC
LPVLGKLFSSRNYLNDKTEVVVIVTPYIVQPANPGELRDALDDVTRPSSDIEFVLQRSLG
CHHHHHHHHCCCCCCCCCCEEEEEECEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
IDPLGGDAPRLAGPAGFVY
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]