Click here to switch to the map view.

The map label for this gene is 53719432

Identifier: 53719432

GI number: 53719432

Start: 2166995

End: 2168047

Strand: Reverse

Name: 53719432

Synonym: BPSL1819

Alternate gene names: NA

Gene position: 2168047-2166995 (Counterclockwise)

Preceding gene: 53719433

Following gene: 53719431

Centisome position: 53.21

GC content: 77.3

Gene sequence:

>1053_bases
ATGTCCCATTTTCTCAAGCTCGCCGGCCTGATGCTCGTCGCGGTGGTCGGCGCGTTTCTGTTCCGTGTGCTGTACGTCGC
GGCGTCGCAGCCGCGCCCGGCCGCGCCGCCGCAGCAGGTGCGCGTGCGTGTGGCGGCCGCCGATCTGCCGGCGGGCCTGC
TGCTGCGCGATGCCGACCTCGGCTGGAAGACGATGGCGCGCTCCGCCGCGCCCGCCGGCGCGTTGATCGAGGGCGATGCG
CGCGGCGACGGCAAAGCCGCCGGCGCGGCGAACGACGCGAGCGCCGCCGCGGCCGGCGAGCCGAAGACGGACCTCAAGGG
CGACCTGCTGCGTCATCCGGTGCGCGCGGGCGCGCCGCTCGGGCCGGCCGACGTGATTTCGCCGAGCGCGCCGGGCTTTC
TCGCGGCCGCGCTCAAGCCCGGCATGCGGGCGATTTCGGTCGCGATCGACGACGTGTCCGGCAACGCCGGCCTCATCGAG
CCGGGCGACTACGTCGACGTGCTGCTCACGCAGCAGCTCGCCGCGCCGGGCGGCACGCCGGCCGATCCGCAGCGCGCGGT
CGAATCGGAGACGATCGCCGCGCGGCTGCGCGTGCTCGCCGTCGGCTCCGCATTCCAGCGGCCCAAGGACGACGCCGCGC
AGCCGAACACCCGCGCGCGCACGGTGACGTTCGAGGTGAGCTCGCGCGACGCGCAGGTGATCACGGTCGGCGCGCATCTG
GGCGCGCTGTCGCTCGCGCTGCGCAGCTTTGCAACGAGCGATCGCGGCGCCGTCGGCACGGCGCCCGCGGAGCCGCCCGC
GCCGCCCGTATGGGCGGGCGACGTGTCGCGCGCGCTGCGTGCGCAGGCGCCGGCCGAGGCGCCCGCGCAGCCGCGCCGCG
TGGGCGCCGCGCGCGCGCAGGCCGAGCGTCGCGTGATCGTCTATCGCGGCTCGAAGCAGGACGATGCGGCGAGCGCCGGT
GCGCCGCTGCCGGGCGGTGTGCCGCCGATTCCGACGCTGCCGCCGCTGCCGGGAGCGGCCGCGCCGCCCGCCGGCGCGCG
GCCCGCGGCGTGA

Upstream 100 bases:

>100_bases
CGTGCCGTACGGGGTCGCGCTCGCGGCGGGCGGCCTGCTCGCCGTATGGGCGCCGGCGGCTTGCCGGCTGCCCGGATGTC
TCGGATGACGGGCGGCTGAT

Downstream 100 bases:

>100_bases
AGACGATGTCGATCGATCAGGAGGACGAGCGCAAATGTGGAGTGTGATCGACGCGATCGGCAAGCGGCGGCAAGCCGCAT
CGGCATCGCCGCGCGCGCGG

Product: putative fimbriae-assembly-like protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; Pilus Assembly Protein CpaB; Pilus Assembly Protein; SAF Domain-Containing Protein; CpaB Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSHFLKLAGLMLVAVVGAFLFRVLYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDADLGWKTMARSAAPAGALIEGDA
RGDGKAAGAANDASAAAAGEPKTDLKGDLLRHPVRAGAPLGPADVISPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIE
PGDYVDVLLTQQLAAPGGTPADPQRAVESETIAARLRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSRDAQVITVGAHL
GALSLALRSFATSDRGAVGTAPAEPPAPPVWAGDVSRALRAQAPAEAPAQPRRVGAARAQAERRVIVYRGSKQDDAASAG
APLPGGVPPIPTLPPLPGAAAPPAGARPAA

Sequences:

>Translated_350_residues
MSHFLKLAGLMLVAVVGAFLFRVLYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDADLGWKTMARSAAPAGALIEGDA
RGDGKAAGAANDASAAAAGEPKTDLKGDLLRHPVRAGAPLGPADVISPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIE
PGDYVDVLLTQQLAAPGGTPADPQRAVESETIAARLRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSRDAQVITVGAHL
GALSLALRSFATSDRGAVGTAPAEPPAPPVWAGDVSRALRAQAPAEAPAQPRRVGAARAQAERRVIVYRGSKQDDAASAG
APLPGGVPPIPTLPPLPGAAAPPAGARPAA
>Mature_349_residues
SHFLKLAGLMLVAVVGAFLFRVLYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDADLGWKTMARSAAPAGALIEGDAR
GDGKAAGAANDASAAAAGEPKTDLKGDLLRHPVRAGAPLGPADVISPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEP
GDYVDVLLTQQLAAPGGTPADPQRAVESETIAARLRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSRDAQVITVGAHLG
ALSLALRSFATSDRGAVGTAPAEPPAPPVWAGDVSRALRAQAPAEAPAQPRRVGAARAQAERRVIVYRGSKQDDAASAGA
PLPGGVPPIPTLPPLPGAAAPPAGARPAA

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35216; Mature: 35085

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFLKLAGLMLVAVVGAFLFRVLYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDADL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCEEEEECCC
GWKTMARSAAPAGALIEGDARGDGKAAGAANDASAAAAGEPKTDLKGDLLRHPVRAGAPL
CHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCHHHCCCCC
GPADVISPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDYVDVLLTQQLAAPGGTP
CHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
ADPQRAVESETIAARLRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSRDAQVITVGAHL
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHH
GALSLALRSFATSDRGAVGTAPAEPPAPPVWAGDVSRALRAQAPAEAPAQPRRVGAARAQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AERRVIVYRGSKQDDAASAGAPLPGGVPPIPTLPPLPGAAAPPAGARPAA
CCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHFLKLAGLMLVAVVGAFLFRVLYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDADL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCEEEEECCC
GWKTMARSAAPAGALIEGDARGDGKAAGAANDASAAAAGEPKTDLKGDLLRHPVRAGAPL
CHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCHHHCCCCC
GPADVISPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDYVDVLLTQQLAAPGGTP
CHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
ADPQRAVESETIAARLRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSRDAQVITVGAHL
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHH
GALSLALRSFATSDRGAVGTAPAEPPAPPVWAGDVSRALRAQAPAEAPAQPRRVGAARAQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AERRVIVYRGSKQDDAASAGAPLPGGVPPIPTLPPLPGAAAPPAGARPAA
CCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA