| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gltJ [H]
Identifier: 53719421
GI number: 53719421
Start: 2155528
End: 2156253
Strand: Reverse
Name: gltJ [H]
Synonym: BPSL1808
Alternate gene names: 53719421
Gene position: 2156253-2155528 (Counterclockwise)
Preceding gene: 53719422
Following gene: 53719420
Centisome position: 52.92
GC content: 71.21
Gene sequence:
>726_bases ATGGACGCCTGGCTCGCTCCCAAATATCTGATGTGGTTATGGCAGGGCTTCCTGCTGACGCTCGGCCTGTCGCTCGCGGC GGCCGTCACGGCGACGCTCGCGGGCTTCGCGCTCGCGATCGCCCGGCACGCGAAGCGCGCATCGCCGCGGCGCGCGGCGG CCGCGTACGTCGTCGCGTTTCGCAACACGCCGCTCGTCGTGCAGTTGCTGTTCTGGTATTTCGGCGTCGCCGCGCTGCTG CCCGAGCCGGCGATGGCGTGGCTCAACGCGCCTCATGCGCTCGACGTCGGCGGCCTCGCGCTGCGCTGGCCGTCGTTCGA GTTCGTCGCGGGCTGGCTCGGCCTGAGCGGCTACACGAGCGCGTTCGTCGCCGAGGAGTTTCAGGCGGGGCTGCGCGGCG TGCCGGCCGGCCAGCATCACGCGGCGAGCGCGCTCGGCCTGTCGCCGCTGCAGGCGTTTCGCTTCGTCGTGCTGCCGCAG GCGGTGCGCATCGCGCTGCCGCCGCTCTTCGGCCAGTACATGAACCTGATCAAGAACTCGTCGCTGACGATGGCGATCGG CGTCGCCGAGCTGTCGTACGCATCGCGCCAGGTCGAGACCGAGACGTTCAGGACCTTCGCCGCATTCGGCGTGTCGACCG TGCTGTACGTCGCGGCGGTCGCGCTGGTCGAGGCGGCCGCGCAATGGACGCTGCGGCGGCGCGATCGCACGTTCGCGGGG CGCTGA
Upstream 100 bases:
>100_bases ACGCGCGCGAACGACGCGATACGCGGCGCGCAATCACGCGACAAGCAATCACGCGACAAGCAATCTGCGGCCGCCCGCGC GGGCGGCCCGAAGCAATGAG
Downstream 100 bases:
>100_bases CGATGGATCTGTCGATACTCGCGAACAATCTGCCGTACCTGCTCGTCGGCGCGTTTCCGGACGGCTCGCTCGGCGGCGCC GCGCTGTCGCTCGTGCTCGC
Product: putative amino acid transport system, membrane protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQLLFWYFGVAALL PEPAMAWLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQ AVRIALPPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWTLRRRDRTFAG R
Sequences:
>Translated_241_residues MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQLLFWYFGVAALL PEPAMAWLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQ AVRIALPPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWTLRRRDRTFAG R >Mature_241_residues MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQLLFWYFGVAALL PEPAMAWLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQ AVRIALPPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWTLRRRDRTFAG R
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=228, Percent_Identity=33.7719298245614, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1788226, Length=230, Percent_Identity=30, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI48994930, Length=169, Percent_Identity=38.4615384615385, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=30.3921568627451, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=29.6650717703349, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=30.316742081448, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=23.9819004524887, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26098; Mature: 26098
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEE RNTPLVVQLLFWYFGVAALLPEPAMAWLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTS CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHH AFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIKNS HHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWTLRRRDRTFAG CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C >Mature Secondary Structure MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEE RNTPLVVQLLFWYFGVAALLPEPAMAWLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTS CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHH AFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIKNS HHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWTLRRRDRTFAG CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]