| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is fct [H]
Identifier: 53719389
GI number: 53719389
Start: 2095250
End: 2097514
Strand: Reverse
Name: fct [H]
Synonym: BPSL1775
Alternate gene names: 53719389
Gene position: 2097514-2095250 (Counterclockwise)
Preceding gene: 53719390
Following gene: 53719388
Centisome position: 51.48
GC content: 67.81
Gene sequence:
>2265_bases TTGATGAAGGTGCGGCCCTCGCGGCCGCTTTGCAACTTGGAGCAACGGAAGATGGAGTGGGCAACCAGCACGCGCGTGCG TGCGATCGCGGCCGGCGTGGCGTTCTACGCGGCGGCGGCGGGTCATGCGCAGGCACAGGCGGCGCAGCCGGGGGCGGACG CGCGGCAGCCGGGCGGCGAGGCGAAGGCAGACACCGCGGCGGGCGGCACGTTGCCCGCGATCTCGGTGTCGGGAGCAGCG GAGCGCGACGCGAGCGTCGGCCTCGTCGCGCGGCGCAGCATGACGGGCACGAAAACGGATACGCCGATCATCGAGATTCC ACAGACGATCAACGTCGTCACCGCGCAGCAGATCGAGGCGACGGGCGCGACCGACATCAATCAGGCGTTCCGCTACATTC CGGGCTTCTCGAGCTACGGGTCGGACAACCGTTCGGACTGGTACGCGGCGCTGCGCGGCTTCACGCCGACCGTGTTCGTC GACGGGCTGCAGGTGCCGAACACGATCAACCTGTCGAGCTGGCGCGTCGATCCGTACATGATCGACAGCATCGCCGTGCT GCGCGGCCCGACGTCGGTGCTGTACGGGCAGGGCGATCCCGGCGCGATCGTCGACGTGCAGAGCAAGCTCGCGAACGGCG AGCGCATCCGCGAGCTCGGCGTGCAGGTCGGCAACTACGCGCGCAAGCAGCTGATGTTCGACATCGGCGACACGATCGGC AAGGACGGCACGCTGTCGTACCGGATCGTCGGCGTCGGCCGCGACGGCAACGCGCAGACGGGGCCGCTCGCCGACCAGCG CGTGTCGTTCGCGCCGTCGCTCAAATGGCAGCCGAACGCGGACACGTCGCTCACCCTCGCCGCGACGTACCTGCAGGACT GGGGCGACACGTCGAGCAACTTCCTGCCGTCGCGCGGCACCGTGCTGCCGAATCCGAACGGCACGATCTCGGACGATCTG TACACGGCCGATGCGAACTTCGACCATTACCGCAAGAAGCAGTGGTCGCTCGGCTATCAGTTCGAGCACAAGCTGAACCC GGTGTGGACGCTGCGGCAGAACGTGCGCTGGATGCACCTGTCGCTCGACGACGCGTCCGTCTACGGCGGCGGCCTCGACG ACGCAGACCCGACGATGGCGACGATGACGCGCTACGCGGGCCTGTTCCAGTTCAACTACAGCCGCTTCGACGTCGACAAC CAGGCGCAGGCGAAATTCACGACGGGCCCGCTTTCGCACACGCTGCTGTTCGGCTTCGACTACAACCGCCAGACGACGAC CGATAGCGAATGGCTCGCGAAGGGGCCGAGCCTGAACCTGTACCGGCCCGTCTACACGCCGATTCCGTCCGACATCTTCA GCGGGCCGAACGCGTACCCGCGCACCGACACGAAGACGACGCTGAACGCATTCGGCCTGTACGTGCAGGACCAGATCAAG TGGCGGCGCTGGGTGCTCACGCTCGGCGGCCGGCAGGACTGGACGCGCACGTCGCAGGACGACATCGCGAACGCGGCGAG CTTCAGGCAGAACGACCACGCGTTCAGCGGGCGCGTGGGCCTCACGTATCTCGGCGACTACGGGCTCGCGCCGTATCTCA GCTATTCGACGTCGTTCAATCCGCAGATCGGCCTGAAGCTCGCGGGCGGCGGGCTCGCGACGCCGACCAAGGGCCGCCAG ATCGAGGCGGGCCTGCGCTGGCAGCCGCCCGGCAAGAACCTGATGCTGAACGCGGCCGTCTACCAGATCAACCAGACGAA CGTCGCGATGAGCAATCCGAACGACCCGACGAGCAGCACGTTCGTGCAGGTGGGCGAGGTGCGCTCGCGCGGCGTCGAGC TGAGCGCGGTGGGCAACCTGTCGCGCGAGCTGTCGGTGATCGCCGCGTACGTCTATCAGGACGTGAAGAACGTGCGGGCG AACGACAACACGCTGAACAAGTGGCCCGTCGACGTGCCGCGGCCGCGCCAGATCGCGTCGCTGTGGGCCGATTGGACGTG GCGCACCGGGCCGCTCACGGGCTTCGGCGTCGGCGCGGGCGTGCGCTACATGAGCGCGGCGGCGGGCGCGGCCGACAATT CGCTCACGGTGCCGAGCTACACGCTGTTCGACGCGGCGCTGCACTACGAGCTGCGCAACTGGCGTTTCGCGCTCAACGCG ACGAACCTGTTCAACCGCCGCTACGTGGCCGGCTGCCAGTCGGATGCGGTGTGCATGTACGGCAACCAGCGCACCGTGAT CGCGACCGCGAAATACAACTGGTAA
Upstream 100 bases:
>100_bases CCGACACGACCGAATACGAAGAAGCCGACCCGGCCGCCGGCCGCGCGCGGCCGCGACACGAAAACAACGGGGTGAGCGAC GGCCGGCTGGCCATCGCTCT
Downstream 100 bases:
>100_bases GCGCGTTTCATCACCCGATGGGCGGCGCGGCGGCGCGCCGCCCGAACGAGAGGACAACACTGCGATGGCAAAGAAGAAAC TCGTCTACATCTGGTCGCTC
Product: putative iron uptake receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MMKVRPSRPLCNLEQRKMEWATSTRVRAIAAGVAFYAAAAGHAQAQAAQPGADARQPGGEAKADTAAGGTLPAISVSGAA ERDASVGLVARRSMTGTKTDTPIIEIPQTINVVTAQQIEATGATDINQAFRYIPGFSSYGSDNRSDWYAALRGFTPTVFV DGLQVPNTINLSSWRVDPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIRELGVQVGNYARKQLMFDIGDTIG KDGTLSYRIVGVGRDGNAQTGPLADQRVSFAPSLKWQPNADTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGTISDDL YTADANFDHYRKKQWSLGYQFEHKLNPVWTLRQNVRWMHLSLDDASVYGGGLDDADPTMATMTRYAGLFQFNYSRFDVDN QAQAKFTTGPLSHTLLFGFDYNRQTTTDSEWLAKGPSLNLYRPVYTPIPSDIFSGPNAYPRTDTKTTLNAFGLYVQDQIK WRRWVLTLGGRQDWTRTSQDDIANAASFRQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGLKLAGGGLATPTKGRQ IEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVRA NDNTLNKWPVDVPRPRQIASLWADWTWRTGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNA TNLFNRRYVAGCQSDAVCMYGNQRTVIATAKYNW
Sequences:
>Translated_754_residues MMKVRPSRPLCNLEQRKMEWATSTRVRAIAAGVAFYAAAAGHAQAQAAQPGADARQPGGEAKADTAAGGTLPAISVSGAA ERDASVGLVARRSMTGTKTDTPIIEIPQTINVVTAQQIEATGATDINQAFRYIPGFSSYGSDNRSDWYAALRGFTPTVFV DGLQVPNTINLSSWRVDPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIRELGVQVGNYARKQLMFDIGDTIG KDGTLSYRIVGVGRDGNAQTGPLADQRVSFAPSLKWQPNADTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGTISDDL YTADANFDHYRKKQWSLGYQFEHKLNPVWTLRQNVRWMHLSLDDASVYGGGLDDADPTMATMTRYAGLFQFNYSRFDVDN QAQAKFTTGPLSHTLLFGFDYNRQTTTDSEWLAKGPSLNLYRPVYTPIPSDIFSGPNAYPRTDTKTTLNAFGLYVQDQIK WRRWVLTLGGRQDWTRTSQDDIANAASFRQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGLKLAGGGLATPTKGRQ IEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVRA NDNTLNKWPVDVPRPRQIASLWADWTWRTGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNA TNLFNRRYVAGCQSDAVCMYGNQRTVIATAKYNW >Mature_754_residues MMKVRPSRPLCNLEQRKMEWATSTRVRAIAAGVAFYAAAAGHAQAQAAQPGADARQPGGEAKADTAAGGTLPAISVSGAA ERDASVGLVARRSMTGTKTDTPIIEIPQTINVVTAQQIEATGATDINQAFRYIPGFSSYGSDNRSDWYAALRGFTPTVFV DGLQVPNTINLSSWRVDPYMIDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIRELGVQVGNYARKQLMFDIGDTIG KDGTLSYRIVGVGRDGNAQTGPLADQRVSFAPSLKWQPNADTSLTLAATYLQDWGDTSSNFLPSRGTVLPNPNGTISDDL YTADANFDHYRKKQWSLGYQFEHKLNPVWTLRQNVRWMHLSLDDASVYGGGLDDADPTMATMTRYAGLFQFNYSRFDVDN QAQAKFTTGPLSHTLLFGFDYNRQTTTDSEWLAKGPSLNLYRPVYTPIPSDIFSGPNAYPRTDTKTTLNAFGLYVQDQIK WRRWVLTLGGRQDWTRTSQDDIANAASFRQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFNPQIGLKLAGGGLATPTKGRQ IEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSSTFVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVRA NDNTLNKWPVDVPRPRQIASLWADWTWRTGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNA TNLFNRRYVAGCQSDAVCMYGNQRTVIATAKYNW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=702, Percent_Identity=35.1851851851852, Blast_Score=380, Evalue=1e-106, Organism=Escherichia coli, GI1787024, Length=718, Percent_Identity=23.5376044568245, Blast_Score=139, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82566; Mature: 82566
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVRPSRPLCNLEQRKMEWATSTRVRAIAAGVAFYAAAAGHAQAQAAQPGADARQPGGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC AKADTAAGGTLPAISVSGAAERDASVGLVARRSMTGTKTDTPIIEIPQTINVVTAQQIEA CCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEHHHCCC TGATDINQAFRYIPGFSSYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRVDPYM CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEECCCCEECCCEE IDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIRELGVQVGNYARKQLMFDIGDTIG ECEEEEECCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDGTLSYRIVGVGRDGNAQTGPLADQRVSFAPSLKWQPNADTSLTLAATYLQDWGDTSSN CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCC FLPSRGTVLPNPNGTISDDLYTADANFDHYRKKQWSLGYQFEHKLNPVWTLRQNVRWMHL CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEE SLDDASVYGGGLDDADPTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLLFGFD EECCCEEECCCCCCCCCHHHHHHHHHHEEEECCEEECCCCCCCEEEECCCCCEEEEEEEE YNRQTTTDSEWLAKGPSLNLYRPVYTPIPSDIFSGPNAYPRTDTKTTLNAFGLYVQDQIK CCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHEEEEEHHCC WRRWVLTLGGRQDWTRTSQDDIANAASFRQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFN EEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCCCC PQIGLKLAGGGLATPTKGRQIEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSST CCEEEEECCCCCCCCCCCCEEECCCEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCHH FVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVRANDNTLNKWPVDVPRPRQIAS HEEECHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LWADWTWRTGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNA HHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHEEECCEEEEEEC TNLFNRRYVAGCQSDAVCMYGNQRTVIATAKYNW HHHHCCCEECCCCCCCEEEECCCEEEEEEEECCC >Mature Secondary Structure MMKVRPSRPLCNLEQRKMEWATSTRVRAIAAGVAFYAAAAGHAQAQAAQPGADARQPGGE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC AKADTAAGGTLPAISVSGAAERDASVGLVARRSMTGTKTDTPIIEIPQTINVVTAQQIEA CCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEEHHHCCC TGATDINQAFRYIPGFSSYGSDNRSDWYAALRGFTPTVFVDGLQVPNTINLSSWRVDPYM CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEECCCCEECCCEE IDSIAVLRGPTSVLYGQGDPGAIVDVQSKLANGERIRELGVQVGNYARKQLMFDIGDTIG ECEEEEECCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDGTLSYRIVGVGRDGNAQTGPLADQRVSFAPSLKWQPNADTSLTLAATYLQDWGDTSSN CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCC FLPSRGTVLPNPNGTISDDLYTADANFDHYRKKQWSLGYQFEHKLNPVWTLRQNVRWMHL CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECCCCCEEEECCCCEEEEE SLDDASVYGGGLDDADPTMATMTRYAGLFQFNYSRFDVDNQAQAKFTTGPLSHTLLFGFD EECCCEEECCCCCCCCCHHHHHHHHHHEEEECCEEECCCCCCCEEEECCCCCEEEEEEEE YNRQTTTDSEWLAKGPSLNLYRPVYTPIPSDIFSGPNAYPRTDTKTTLNAFGLYVQDQIK CCCCCCCCHHHHHCCCCCCEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHEEEEEHHCC WRRWVLTLGGRQDWTRTSQDDIANAASFRQNDHAFSGRVGLTYLGDYGLAPYLSYSTSFN EEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCCCC PQIGLKLAGGGLATPTKGRQIEAGLRWQPPGKNLMLNAAVYQINQTNVAMSNPNDPTSST CCEEEEECCCCCCCCCCCCEEECCCEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCHH FVQVGEVRSRGVELSAVGNLSRELSVIAAYVYQDVKNVRANDNTLNKWPVDVPRPRQIAS HEEECHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LWADWTWRTGPLTGFGVGAGVRYMSAAAGAADNSLTVPSYTLFDAALHYELRNWRFALNA HHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHEEECCEEEEEEC TNLFNRRYVAGCQSDAVCMYGNQRTVIATAKYNW HHHHCCCEECCCCCCCEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]